Rahnella sikkimica: BV494_05295
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Entry
BV494_05295 CDS
T05331
Name
(GenBank) GntR family transcriptional regulator
KO
K13654
GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_05295
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BV494_05295
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GFIT
Motif
Pfam:
FCD
GntR
HTH_24
B12-binding_2
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AVF34378
UniProt:
A0A2L1UNG8
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Position
1148905..1149570
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AA seq
221 aa
AA seq
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MFEMEKAQRISLTMQVEAKLKGALIVGVLKPGARLVTKEIASQLGTSVTPVREALLRLVS
AGALDATPAQAFMVPKIELSRYQEITLIRKNLEGLAVSQACEVITAEHIALLKTLNAKFL
AAKRENKVEEALEANREFRFTLYEMAGMPTLMALIEQLWVQIGPCFNYLYPQSSPMTQGR
HNYDQLLLALEAGDGKRCVKLVHKAIDDGAAILVEHYFLQE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagatggaaaaagcgcagcggatcagcctgaccatgcaggttgaagccaaactg
aaaggcgcgctgattgtcggtgtactcaagccgggcgcgcgactggtcacgaaagagatt
gccagccagctgggcaccagcgttacgccggtgcgcgaagcactgctgcggctggtttcc
gccggtgcgctggatgccacgcccgcgcaggcgtttatggtgccgaaaattgaattgtcg
cgttatcaggaaatcacgctgatccgcaaaaatctggaagggctggcggtgtcacaggcc
tgcgaggtcatcaccgcagagcacatcgcgttgctgaaaaccctcaacgcaaaattcctg
gccgccaaaagagagaacaaagtggaagaggcgctcgaggccaaccgcgagttccgcttt
acgttgtatgaaatggccggaatgccgacgctgatggcgctgatcgaacaactttgggtg
cagatcggcccgtgctttaattacctgtatccgcagtcttcgccgatgacgcagggcagg
cacaattatgatcaactgctgctggcgctggaagccggtgacggtaaacgctgcgtgaag
cttgtccacaaagcgattgatgacggtgcggctattctggtggaacactattttttgcag
gaatag
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