Rahnella sikkimica: BV494_05410
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Entry
BV494_05410 CDS
T05331
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
rox
Rahnella sikkimica
Pathway
rox02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BV494_05410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_05410
02044 Secretion system [BR:
rox02044
]
BV494_05410
Transporters [BR:
rox02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
BV494_05410
Secretion system [BR:
rox02044
]
Type I secretion system
Adhesin protein transporter
BV494_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_18
AAA_29
RsgA_GTPase
AAA_23
Pex24p
MMR_HSR1
AAA_15
Zeta_toxin
NACHT
AAA_22
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AVF37366
UniProt:
A0A2L1UWM8
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Position
1193276..1195441
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AA seq
721 aa
AA seq
DB search
MLEKGYTAWLKAMLDIAKHYRLDYSEEHVKTTVAWEMGAPADVILDEMAKKLGLGRVTRD
FHPNDLDPMSVPFILMLDNGRLGVVTHLDASGQCAVQFTEDQGLETTLTSEQLAERAKSI
TLLRPLHSIPDARVDNYIKPYKKNWFWDLALKDWRRYSDIMLASMIANVLALAGMLFSMQ
VYDRVVPSQSVPTLWVLFGGVMLAITFEFVMRMVRVHISDVVGKRADLRISDRVFGRALR
IKNSARSKSTGSFISQIRELESVRELITSTTLSALSDLPFFLLFTVILWMIGGPLVFVVL
LALPLLLIPGILIQRPLAKLANEGMRESAVRNASLVEAVESLEDIKLMRAEQRFQNQWNH
CNEVSAEISMRQRFLTSLLMTWTQEVQSIVYAVVLLVGCYLVMQGDMTTGALVGTTILAS
RTIAPLAQISGVLSRWQQAKVARKGLDELMQRPIDQENGQKMVHKAQIAGEYAINDAVFY
YDEEAKAVNLAISRLNIKPGEKIAILGKNGAGKSTLLQVLAGMQQVQQGQVVLDNVNIKQ
IDPADLRRDVALHNQHARLFFGSVHENITMGRPQATDEEIHEALVISGALAFVQQKEDGL
NFLIHEGGVGLSGGQRQALLLARNIITQPQVLLLDEPTAWLDEISEWNLISQLSTWGKDK
TLIIATHRLALLQLVDRIIVMDNGRISLDGNKDEILNKHFRPKGQTAAATAKPATSKEAS
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaaaggctacaccgcgtggctcaaagccatgctcgatatcgcgaaacactac
cggctggattactcagaagagcacgtgaaaaccaccgttgcctgggagatgggcgcaccg
gcagacgtgattcttgatgagatggcaaaaaaactggggctgggccgcgtcacgcgtgac
ttccacccgaacgatctcgatccgatgagcgtgccgttcatcttaatgctcgacaacggg
cggctgggcgtggtgacacatctggacgccagcggccagtgcgccgtgcaatttaccgaa
gatcagggtctggaaaccaccctgacatcagaacagctggcggaacgcgcaaaaagcatc
acgcttctgcgtccgctgcacagcattcccgatgcgcgcgttgataactacatcaagccg
tacaagaaaaactggttctgggatctggcactgaaagactggcgtcgttacagcgacatc
atgctggcctcgatgattgccaacgtgctggcgctggcgggcatgttgttttccatgcag
gtttacgaccgcgtggtgccgtcgcaatccgtcccgaccttgtgggtattgtttggcggc
gtgatgctggcgattacctttgaattcgtgatgcgcatggtgcgcgtccatatttctgac
gtggtggggaaacgtgccgatttgcgcatctccgaccgcgtctttggccgtgcgctgcgc
attaaaaacagcgcacgctcgaaatccaccggttcctttatctcgcaaatccgcgaactg
gaatccgtgcgcgagctgatcacctcgaccacgctgagcgcgctgtcggacctgccattc
ttcctgctgttcaccgtgattttgtggatgatcggcggcccgctggtgtttgtggtgtta
ctggcgctgcctttgctgctgatccccggcatcctgatccagagaccgctggcgaaactg
gccaacgaagggatgcgcgaatcggcggtgcgtaatgcctcgctggtggaagcggtggag
tcactcgaagacatcaaactgatgcgcgccgagcagcgtttccagaaccagtggaaccac
tgtaacgaagtgtctgccgaaatcagtatgcgtcagcgttttctgaccagcctgctgatg
acctggacgcaggaagtgcagtcgattgtgtacgctgtcgtgctgctggtggggtgctat
ctggtgatgcagggcgacatgaccaccggtgcgctggtcgggacaaccattctggcatcc
cgcaccattgcgccgctggcgcagatttccggcgtgctgtcgcgctggcagcaggcgaag
gttgcgcgtaaagggctggatgaactgatgcaacgcccgattgatcaggaaaacggccag
aagatggttcacaaggcgcagatcgccggtgaatacgcgatcaatgatgcggtcttctat
tacgacgaagaagccaaagcggtgaatctggcgatttcgcgtctgaacatcaaaccgggc
gagaagattgccattctgggcaaaaacggcgcaggcaaatcgacgctcctgcaagtgctg
gcaggcatgcaacaggttcagcaagggcaggtggtgctcgataacgtcaacatcaaacag
atcgacccggcagatttacgccgcgacgtggcgctccacaaccagcacgcgcgtctgttc
ttcggctcagtgcatgaaaacatcaccatgggacgcccgcaggcgaccgacgaagaaatc
catgaagcgctggtcatcagcggcgcgctggcgtttgtgcagcaaaaagaggacggcctg
aacttcctcattcacgaaggcggcgtcgggctttccggcgggcaacgtcaggcgcttttg
ctggcgcgtaacatcatcacgcagccgcaggttttgctgctcgatgaaccgaccgcgtgg
ctcgacgagatttccgagtggaacctgatttcccagttatcgacctggggcaaagacaaa
acgctgattattgccacgcaccgtctggcgctgctgcaactggtggatcgaattatcgtc
atggataacgggcgtatttcgctcgacggtaataaggatgagatcctgaacaaacacttc
aggccgaaaggacaaaccgctgccgccaccgcgaaaccggcgacaagcaaggaggcatca
caatga
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