Rahnella sikkimica: BV494_05630
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Entry
BV494_05630 CDS
T05331
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rox
Rahnella sikkimica
Pathway
rox00541
Biosynthesis of various nucleotide sugars
rox01100
Metabolic pathways
rox01250
Biosynthesis of nucleotide sugars
Module
rox_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BV494_05630
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rox01005
]
BV494_05630
Enzymes [BR:
rox01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
BV494_05630
Lipopolysaccharide biosynthesis proteins [BR:
rox01005
]
Lipid A
BV494_05630
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
MjAgo_N-like
Motif
Other DBs
NCBI-ProteinID:
AVF34435
UniProt:
A0A2L1UNC8
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Position
1244308..1245162
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AA seq
284 aa
AA seq
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MKHKVVSIQDIKVANDLPFVLFGGMNVLESRDMAMRVCEHYVTVTQKLGIPYVFKASFDK
ANRSSIHSYRGPGLDEGMKIFQELKQTFGVKIITDVHESWQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNDQVILCDRGSNFGYDNLVVD
MLGMNVMINATGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGIAGLFIEA
HEDPANAKCDGPSALPLAKLEPFLVQMKAIDDLVKSFPALDTSK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaagtggttagcattcaggacattaaagtcgccaacgatctgccgtttgtg
ttgttcggtgggatgaacgtactcgaatcacgcgatatggcgatgcgtgtgtgtgaacat
tacgtcaccgtgacacagaaactcggcattccttacgttttcaaagcgtcttttgataaa
gccaaccgctcgtcgattcattcctaccgtggtccgggtctggatgaaggcatgaaaatt
ttccaggaactgaagcaaactttcggcgtgaaaatcatcaccgacgttcacgaatcctgg
caggcacagccggttgcagacgtggttgatgtgattcagctgcctgccttcctggcgcgt
cagactgacctggtggaagcgatggccaaaaccggtgccgtgatcaacgtgaaaaaaccc
cagttcgtgagcccgggtcagatgggtaacatcgtggacaaattcaaagaaggcggcaac
gatcaggttattctgtgcgatcgcggcagcaacttcgggtatgacaatctggttgtcgac
atgctgggcatgaacgtgatgatcaacgcaacgggcggacacccggtgatcttcgacgtg
actcacgcactgcaaacccgcgacccgttcggcgcagcgtccggcggtcgtcgtgcgcag
gttgccgaactggcgcgcgcagggatggcggttggcattgctggcctgttcatcgaagca
cacgaagacccggcgaatgcgaaatgcgatggcccgtctgcactgccgctggcgaaactg
gagccattcctggttcagatgaaagccatcgacgatctggtgaaaagcttcccggcgctc
gataccagcaaataa
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