Rahnella sikkimica: BV494_06075
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Entry
BV494_06075 CDS
T05331
Name
(GenBank) TetR family transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_06075
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BV494_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_9
TetR_C_29
HTH_31
Phage_T7_Capsid
WH_DRP
DUF6240
Motif
Other DBs
NCBI-ProteinID:
AVF34519
UniProt:
A0A2L1UNK4
LinkDB
All DBs
Position
complement(1352992..1353630)
Genome browser
AA seq
212 aa
AA seq
DB search
MMNSDTGSKVRVARERTLENIHAAAIAEFSEKGFQGATTQAIAQRAGIKKAQLHYYIAGK
EELYEELLQKVLKVWGDIIQFDPTLSEPEAVLSRYIRNKLSFSFDQPELSRIFTSEVLSG
GHYLQKYWPQATQNIVGKENLIQQWIAEGKIRPLDARLFIMHIWALTQYYADFAVQVKHM
YGNFDGDDVAREHIIDEVTTLILNGCRMGDNA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagcgataccggcagtaaagtccgcgtagcccgcgagcgcacgctggaaaat
atccatgcggccgcgattgcggagttcagtgaaaaaggctttcagggcgcgactacgcag
gcgattgcacagcgcgcggggatcaaaaaagcccagttgcattactacatcgccggaaaa
gaagagctgtacgaggagctcttgcagaaagtgctgaaagtctggggcgacattatccag
tttgacccgacgctcagtgaaccggaagccgtgctgagccgctacatccgcaacaagctg
agtttttcgttcgaccagccggagctgtcgcgaattttcaccagcgaagtgctgagtggc
ggccattatttgcagaagtactggccgcaggcgacgcagaacatcgtcggaaaagagaac
ctgatccagcagtggattgctgagggcaaaatccgcccgctggatgcacgtctgttcatc
atgcatatctgggcgctgacgcagtattacgccgatttcgcggtgcaggtgaagcacatg
tacggcaattttgacggcgatgacgtcgcacgggaacacattatcgacgaagtcaccacg
ctgattttgaacgggtgccggatgggggataacgcatga
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integrated database retrieval system
