Rahnella sikkimica: BV494_06645
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Entry
BV494_06645 CDS
T05331
Name
(GenBank) transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_06645
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BV494_06645
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
HTH_IclR
TetR_N
Rhodanese
TrmB
HTH_Crp_2
HTH_Tnp_ISL3
MarR_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
AVF34625
UniProt:
A0A2L1UNX7
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All DBs
Position
1488884..1489906
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AA seq
340 aa
AA seq
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MSTMQEVAAKAGVSKATVSRVLSGKGYVSQETKDQVFKAIEEAGYRPNLLARNLATSKSM
CIGLVVTNTLYNGHYFSELISQAAKKLDANGRQLILVDGKHSAEEEQDAIQFLHDLRCDG
IIIYPRFLSVDEMDLLIDKYKKPVMVVNRKLRKHQSHCIYCDHKGSSFNATQALIERGHR
DIAFITGSMDSPTAIERLSGYRDALTASGIPVKESLIVPGKWSPASGAAAVETLLASGQP
FSALLASNDEMAIGAMKQLNTAGIGVPAQVSVIGFDNIPTAPFLIPALSSVKDPVSDMIS
EVINQIIAMLDGGYLSEQNHFSSDLILRDSVIDGPYKTRQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggcagccaaagcgggcgtctcgaaagccacggtttcccgt
gtgctttccggcaaaggttatgtgagccaggaaaccaaagatcaggtcttcaaagccatt
gaggaagcgggataccggcccaatttgctggcgagaaatctggcgaccagcaagtcgatg
tgcatcgggctggtggtgacgaatacgttatataacgggcattatttcagcgagctgatt
tcacaggccgcgaaaaaactcgacgctaacggacgccagctgattctggtcgatggcaaa
cacagcgccgaagaagaacaggacgccattcagtttctgcacgatttacgctgtgacggc
attattatttacccgcgttttttatcggtcgatgaaatggatttgctgatcgacaaatat
aaaaagccggtgatggtcgtgaaccgcaaattacgcaaacaccagagtcactgtatttat
tgtgaccacaaagggtcgagttttaacgccacgcaggcgcttattgaacgcgggcatcgg
gatattgcgtttattaccggttctatggattccccgactgcgattgagcgcctttccggt
taccgcgacgcgctgacggcctcaggaataccggtgaaagaatcgctgatcgtgccggga
aaatggtcaccggccagtggtgccgcggccgttgaaacgctgctggcgtccggtcaaccg
ttcagcgccctgcttgccagtaacgatgaaatggcgatcggcgcgatgaaacagctcaac
accgccggaattggcgtgcctgcgcaggtttcggtgatcgggtttgataatattccgaca
gcgccgtttcttattccggcgctgtcgagcgtgaaagatccggtcagcgatatgatcagt
gaagtgattaatcagattatcgccatgctcgatggcggttatttgtccgaacagaatcac
ttctcttctgaccttattcttcgtgattctgtcatcgacggcccttataaaactcgccaa
taa
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