Rahnella sikkimica: BV494_06840
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Entry
BV494_06840 CDS
T05331
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rox
Rahnella sikkimica
Pathway
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_06840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_06840
Transporters [BR:
rox02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BV494_06840
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVF34663
UniProt:
A0A2L1UP02
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All DBs
Position
complement(1544065..1545642)
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AA seq
525 aa
AA seq
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MKVRVPSLLFLLMMAVTRVDAATPKDTLVVAGSLEGIISLDPAESFETVSSGNLVNLYQQ
LVQSDRQHPDKLDPDAAASWQPGPDAHSLIFTLKPGQKFASGNPVTADDVIYSFTRVVKL
NKSPSFILGELGWTPENVEGNLKKIADDKVQLSWPADIGSGLVLSILSAPVAGIVDSKLL
KEHVDQNDFGNSWLRSRSAGSGAFEVRSYVPHEALILKRNPNARPLAKLENVLFKNVGDP
STRRLLVVNGDADVAYDLGADQFSSLQKEKGVHVAQFPAAKVFYLAFNVGDTTQPALANP
ALWEAARWLVDYQGISTDLLKGQYGIHQTFLPDGLAGAIDDQPFKYDVAKAKAILSKGGI
APGTKIDLIVINQPPYSDIAQALQASFAKADINLVVHPLVESDVLTRMRAHKFQSIFTYW
AADYLDPNTNASTFAYNVPNGPKTLAQRIQWVIPEISKQTRAAAAESDPTKRKALYADLQ
RELQKNSPFVVALQSKLLVAIRDNVKGTSQNVAGSQLYLDTVTKE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacgtgttccttccctgttattcctgctgatgatggccgtgacccgcgtggat
gcggcgacgccaaaagatacgctggtcgtcgcgggttcgcttgaaggcattatcagcctc
gatccggcggaaagttttgaaaccgtcagttccggcaatctggttaacctttatcagcaa
ctggtgcagtctgaccggcagcatcccgataagctcgacccggacgccgctgcgagctgg
cagccggggccggacgcgcacagtctgatcttcaccctcaaaccgggccagaaatttgcc
agcggcaatccggtgacggccgacgatgtgatttattcgtttacccgcgtggtgaaactc
aataaaagtccgtcgtttattcttggtgaactgggctggacgccggaaaacgttgaaggc
aatctgaaaaaaatcgctgacgataaagtccagctcagctggccggccgatatcggcagc
gggctggtgctgagcattctttccgcgccggtcgcaggcattgtggacagcaaactgctg
aaagagcacgtcgatcagaacgatttcggtaacagctggctgcgttcacgttcagcaggc
agcggcgcatttgaagtccgcagctatgtaccgcacgaagcgctgattctcaaacgtaac
ccgaacgccaggccgctggcgaagctggaaaatgtgctgtttaaaaacgtgggcgatccg
tccacacgccgtctgctggttgtgaatggcgatgcggacgtggcttacgatttgggcgct
gaccagttcagctcgctgcaaaaagagaagggcgttcacgtcgcacagttcccggcggcc
aaagtgttctatctggcgtttaacgtcggcgataccacgcaaccggcgctggcaaaccct
gcgctgtgggaagcggcgcgctggctggtggattatcaggggatttctactgacctgctg
aaaggccagtacggaattcatcagaccttcctgccggacggtctggcgggcgcaattgac
gatcagccgtttaaatacgatgtcgccaaagccaaagcgatcctgagcaagggcgggatt
gcaccgggtaccaaaatcgatttaatcgtgatcaaccagccgccgtattctgatattgcg
caggccttgcaggccagctttgccaaagcggatatcaatttagtggtgcatccgctggtg
gaaagcgacgtgctgacccgtatgcgtgcgcataaattccagtcgatcttcacctactgg
gccgcggattacctcgaccccaacaccaacgccagcaccttcgcttataacgtgccaaac
ggcccgaaaacgctggcgcaacgtattcagtgggtgatcccggaaatcagcaaacaaaca
cgtgcggcggcggcggaatcggatccgaccaaacgcaaagcgctgtacgccgatttacaa
cgcgaactgcaaaagaactcgccgtttgtagtggcgctgcaaagtaaattgctggtggcc
atccgcgataacgtgaaaggcacaagccagaacgtggcgggcagccagttgtatctggat
acggtgacgaaggaataa
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