Rahnella sikkimica: BV494_07185
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Entry
BV494_07185 CDS
T05331
Name
(GenBank) porin OmpC
KO
K09475
outer membrane pore protein C
Organism
rox
Rahnella sikkimica
Pathway
rox01501
beta-Lactam resistance
rox02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BV494_07185
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BV494_07185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_07185
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_07185
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Porin_4
Motif
Other DBs
NCBI-ProteinID:
AVF34728
UniProt:
A0A2L1UPH5
LinkDB
All DBs
Position
complement(1613135..1614244)
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AA seq
369 aa
AA seq
DB search
MKLRVLSLVIPALMMAGTAGAAEIYNKDGNKLDLFGKVDGLHYFSNDDSTDGDQSYMRLG
FRGETQINNELTGYGEWEYQAALNSAESADNNNFTRVGFAGLKFGQWGSLDYGRNYGVMY
DVAAWTDVLPEFGGDTYGADNFMFQRANGVLTYRNKGFFGAVDGLDVAVQYQGKNGSATE
SNNGRDVLAQNGDGYGMSLTYDLGEGFSAAAAMMASDRTNEQNGRNNPAIIGNGDKATAY
SGGLKYDANNIYLAAMYTQSYNANRFGKAGSTAYGYADKAQNFEAVAQYQFDFGLRPSVA
YVQSHARNVPGYSNQNLTKYVDIGASYFFNKNMLTYVDYKINLMDDTRLTRDAGINTDDV
VAVGLVYQF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacgcgtactttctctggtcattcccgctctgatgatggctggcaccgccggc
gctgctgaaatctataataaagacggcaacaaactcgacctgttcggtaaagtggacggt
ctgcattatttctccaacgatgacagcactgatggcgaccagtcttatatgcgtctgggc
ttccgtggtgaaacgcagattaataacgaactgaccggttacggtgagtgggaatatcag
gcagccctgaactctgcggaaagcgctgataacaacaatttcacccgtgtcggttttgcg
ggtctgaaatttggccagtggggttcactggactacggccgtaactacggcgtgatgtat
gacgtcgcagcctggaccgacgttctgcctgaattcggcggcgacacctatggcgcggac
aacttcatgttccagcgtgccaacggcgtgctgacttaccgtaacaaaggcttcttcggc
gcagtcgacggtctggatgttgccgttcagtatcagggcaaaaacggcagcgcaactgaa
tccaacaatggtcgcgatgtattagcgcagaacggcgacggctacggcatgtccctgact
tatgacctgggcgaaggcttcagcgcggctgcagcaatgatggcttctgaccgtaccaac
gagcagaacggtcgtaacaacccggcaatcattggtaacggcgacaaagctaccgcgtac
agcggcggcctgaaatatgacgcgaacaatatctacctggcggcgatgtacacccaaagc
tacaacgccaaccgctttggtaaagcaggcagcaccgcttacggttatgcagataaagcg
caaaacttcgaagctgtggcacagtaccagttcgatttcggtctgcgtccgtctgttgcc
tacgtgcagtctcacgcacgtaatgtcccaggttacagcaaccagaacctgaccaaatat
gttgatatcggtgcgtcttacttcttcaacaaaaacatgctgacctacgtggattacaaa
attaacctgatggatgacacccgcctgacccgcgatgctggcatcaataccgacgacgtt
gtggccgtaggcctggtttatcagttctga
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