Rahnella sikkimica: BV494_07310
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Entry
BV494_07310 CDS
T05331
Name
(GenBank) autoinducer 2 import system permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
rox
Rahnella sikkimica
Pathway
rox02010
ABC transporters
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BV494_07310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_07310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_07310
Transporters [BR:
rox02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
BV494_07310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF2304
Motif
Other DBs
NCBI-ProteinID:
AVF34753
UniProt:
A0A2L1UP96
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All DBs
Position
complement(1645729..1646751)
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AA seq
340 aa
AA seq
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MNFLRHYGWEAALLALLIFEIALFGFANPRMLDASTLLFSTSDFITIGIVALPLTLVIVS
GGIDISFGSTIGLCAIALGVLCQAGVPLAFAIILTLALGLACGLLNAALILYTGVNPLVI
TLGTLYLFGGSALLLSGLAGATGFEGIGNFPDAFTNFANQVIFGLPMPLLIFLLATLFFW
LLMHRSRTGRNVFLIGQNARVARYGALPVSRTAFALYGMTGLASAVVAITMTSYFGSARS
DLGVSLLMPAITAVVLGGANIYGGSGSILGTALATLLIGYLQQGLQMVGVSSQVSSALSG
ALLILVVIGRSASLNRGLIRSVFQRYRQRGSASSPSLFTK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttacgccactacggctgggaagcggcattgctggcgctgctgatctttgaa
attgcgctttttggcttcgcaaacccgcgcatgctggatgccagtacgctgctgttcagc
accagcgacttcatcaccatcggcattgtggcgctgccgttaacgctggtgattgtcagc
ggtggcattgatatttcgttcggttcgaccatcggattgtgcgccatcgcgctgggcgtg
ttgtgtcaggcgggggttccgctggcgttcgccatcatcctgacgctggcgctcggtctg
gcctgcggcctgctcaatgcggcactcatactctataccggcgtcaatccgctggtgatc
accctaggcacgttgtacctgtttggcggcagcgccttgctgctatccgggctggcgggc
gcgaccggttttgaaggcatcggtaacttcccggatgcatttacgaatttcgcgaatcag
gtgattttcggcctgccgatgcctctgctgatttttctgctcgccacgctgtttttctgg
ctgctgatgcaccgcagccgcaccggccgcaacgtctttctgatcggccagaatgcccgc
gtggcgcgttacggcgcgttgccggtcagccgcacggcgtttgcattatacggcatgacc
gggctggcgtcggcggtggtggcgatcaccatgacgtcctacttcggttccgcgcgttct
gatctcggcgtctccttgctgatgcccgcgatcaccgccgtggtgttaggcggagccaat
atttacggcggttcaggttccattctcggtacggcgctggcgacgctgctgatcgggtac
ttacaacagggtttgcagatggtcggagtatccagtcaggtgtccagcgcgctttccggt
gcgctgctgattctggtggtgattggccgttctgccagcctcaaccgtggtcttatccgc
agtgttttccagcgttatcgccagcgcgggtctgcgtcttctccttctttattcaccaaa
tga
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