Rahnella sikkimica: BV494_08940
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Entry
BV494_08940 CDS
T05331
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rox
Rahnella sikkimica
Pathway
rox00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BV494_08940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rox01007
]
BV494_08940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rox03016
]
BV494_08940
Enzymes [BR:
rox01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BV494_08940
Amino acid related enzymes [BR:
rox01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BV494_08940
Transfer RNA biogenesis [BR:
rox03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BV494_08940
Prokaryotic type
BV494_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AVF35050
UniProt:
A0A2L1UQ40
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All DBs
Position
complement(1978429..1980816)
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AA seq
795 aa
AA seq
DB search
MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVEPVAGAFNGVVVGEVVECGQHPNAD
KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLPGDFKIKAAKLRGEPSEGMLC
SFSELAISDDHDGIIELPQDAPVGTDIREFLKLDDTTIEISVTPNRADCLGILGVARDVA
VINQLPLVEPEMNPVKATTDTAISIDVQAPQACPRYLGRVVKGINVKAPTPLWMREKLRR
CGTRSIDAVVDITNYVLLELGQPMHAFDLNRIHGGIVVRMAKKDEALTLLDGTKAKLNDD
TLVIADHEKALAMAGIFGGEHSGVNDETQDVLLESAFFAPLSITGRARRQGLHTDASHRY
ERGVDPQLQFKAIERATALLLSICGGEAGPVIDVTSEADLPKAATISLRREKLDRLIGHH
VEDVQVTDILTRLGCQVQHKGDHWVAVAPSWRFDMQIEEDLVEEVARVYGYNNIPDVPVK
ASLVMTKHNEANLSLKRVKNLLVDRGFQEAITYSFVDPKVQALLHPGEEALILPSPISVE
MSAMRLSLWSGLLTAVVNNQNRQQSRVRLFESGLRFVPDTQADLGIRQDVMLSGVISGTK
NEEHWDLARQAVDYYDLKGDLEAILELTGKMNDVQFKVESNPALHPGQSAAIYLRGERIG
FIGVVHPELERKLDLNGRTVVFELLWNKVADRVLPDAKEISRFPANRRDIAVVVAENVPA
DDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISLVLQDTARTLEEEEIAATVAK
CVEALKQRFQASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaactctggttgcgtgagtgggtaaacccagccatcagcagcgaagca
ttatctgaccaaatcaccatggccggtctggaagtcgatggcgtcgagcctgtcgcgggc
gcatttaatggtgtcgtagtcggtgaagttgtcgaatgtggtcagcacccgaatgctgac
aaactgcgtgttacgaaagtaaacgtcggcggcgatcgtcttctggatatcgtttgtggc
gcgccaaactgccgtcagggccttaaagttgccgtcgccaccgtaggcgcggtattgccg
ggcgatttcaaaatcaaggcagccaaactgcgtggcgaaccctctgaaggtatgctgtgc
tctttctctgagctggcgatttcagacgatcacgatggcatcatcgaattaccacaggat
gcgcctgtcggtaccgatattcgtgaattcctgaaactggacgacacgactatcgaaatc
agcgtgacgcctaaccgtgcggattgcctgggcattctgggtgtggcgcgtgacgttgcg
gtgattaaccaacttccgctggttgagccggaaatgaacccggtcaaagccactactgat
accgctatttctatcgatgttcaggcaccgcaggcttgtccgcgttatctgggccgcgtg
gtcaaaggcatcaacgttaaggcacccacgccgttgtggatgcgtgaaaaactgcgccgt
tgcggtacacgttcaatcgatgctgtcgttgatatcaccaactatgtgttgcttgaactc
ggtcagccaatgcacgccttcgatctgaaccgcatccacggcggtatcgttgtgcgtatg
gcgaaaaaagacgaagcgctgactttgcttgatggcaccaaagctaaactgaacgacgac
acgctggtgattgctgaccatgagaaagcgctggcaatggccggtattttcggcggtgag
cattccggtgtgaacgatgaaacccaggatgtcctgctggagtctgcattctttgcgccg
ttatctatcactggccgtgctcgccgtcagggcctgcacaccgacgcatcgcaccgttat
gaacgtggcgttgacccccaactgcaattcaaagccatcgaacgcgccaccgcgttgctg
ctgagcatttgtggtggcgaagccggtccggttatcgatgtcacgtctgaagccgacttg
cctaaagccgcaaccatttccctgcgtcgcgaaaaattggatcgcctgatcggccatcac
gttgaagatgtgcaggtgaccgatattctgacgcgtctgggctgccaggttcagcataaa
ggcgatcattgggtggctgtggcgccaagctggcgcttcgacatgcaaattgaagaagat
ctggtcgaagaagttgcccgcgtttacggttacaacaacatccctgatgtgccggtgaaa
gccagcctggtgatgaccaaacacaatgaagcgaatctgtcgctgaaacgtgtgaaaaat
cttctggttgatcgtggtttccaggaagccatcacttacagtttcgtggatcctaaagtg
caggcattactgcatccgggtgaagaagcgctgattttgccaagcccgatttccgttgaa
atgtcagcaatgcgcctttccctgtggtctggcttgttgactgcggtggtaaataatcaa
aatcgtcagcaaagtcgcgtgcgtttattcgagagcggactgcgctttgtgcctgatact
caagccgatttaggtatccgtcaggacgtcatgctgtctggggtgatctctggaacgaaa
aatgaagagcattgggatctggcgcgtcaggcagttgactactacgatttgaaaggtgat
cttgaggctattcttgagcttaccggcaaaatgaacgatgtacagttcaaggtggaatcg
aatcctgcactgcatcccgggcagagtgcagcgatttatttacgcggcgaacgcattggt
ttcattggtgtagtacacccggaactggaacgtaaactcgatcttaatggccgtactgtc
gtcttcgaactgctgtggaataaggtcgcagaccgcgtactgcctgatgcgaaagagatt
tctcgcttcccggcgaaccgtcgtgacatcgctgttgttgtggctgaaaacgtgcccgca
gacgatattttggcagagtgcaagaaagttggcgcaaatcaggtagttggcgtaaacttg
tttgatgtgtaccgtggcaagggcgtagctgaaggttacaagagcctggctatcagtctg
gtgttgcaggataccgcccgtacactggaagaagaggagatcgccgctaccgttgcaaaa
tgcgtagaggctctaaaacagcgattccaagcatccttgagggattga
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