Rahnella sikkimica: BV494_10050
Help
Entry
BV494_10050 CDS
T05331
Name
(GenBank) ABC transporter substrate binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rox
Rahnella sikkimica
Pathway
rox02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BV494_10050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_10050
Transporters [BR:
rox02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BV494_10050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AVF35256
UniProt:
A0A2L1UQP0
LinkDB
All DBs
Position
2200198..2201838
Genome browser
AA seq
546 aa
AA seq
DB search
MHILRRRNAVTRALALGVLITSSYAVFAADSTPVQGGTLVYLEQQAHTNLYPPAGGFYPN
GGILNQITDKLTYQNPKTLEVEPWIAESWSFNADKTEYTFKLRPGVTFSDGTPLDANAVA
KNFDTYGLGNKERHLPVSEVINNYDHSEVVDPLTVKFYFKKSSPGFLQGTATIGSGLVSL
STLDRNFDALGDATHIIGSGPFVVSKETLGREVDLTARKDYNWGPKNLKQQGRANLDVIK
VIVTGEDSVRIGALLAGQADFIRQVQAYDEKQAKDQNFPIYAAPTKGVNDSISFRPDNAL
VSDLKVRQALLHATNSKQVVETLFSPNYPQATSVIAKTAAGYVDLSNKLTYDPTLSKKLL
DEAGWKPGPNGLRQKDGKTLSLTIYESLPQPQNKEVLQLISQQWNQVGAKLNILAGDAGS
RVADNLDPEKTPANVVEVGRADPDVIKSSFYPTNRDALLQKGGLSSKVKSFRDDKLNDLL
VAISAEVDPKKRLALAGDVQNYLLDQAYVIPIFEEPQVYAGAPYFKGVSFEAVGRPSFYA
AWLEKH
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcttcgccggagaaacgcggtcacacgcgcactggctttaggggtattgatc
accagttcttacgccgtttttgccgccgattcaacgccggttcagggcggaacgctggtt
tatctcgaacaacaggcacacaccaacttatatcctccggcgggaggtttttacccgaac
ggcggcatcctgaatcagatcaccgacaagctgacctatcagaacccgaagacgctggaa
gtcgaaccgtggattgccgaatcctggagcttcaacgccgacaaaaccgaatacaccttc
aaactgcgtccgggcgtgaccttctccgacggcacgccgcttgatgccaacgccgtagcg
aaaaacttcgacacctacgggctgggcaacaaagaacgccatctgccggtttccgaagtg
attaacaactacgaccacagcgaagtggttgatccgctgaccgtgaagttctacttcaaa
aaatcctcaccgggcttcctgcaaggcacggcgaccatcggctccgggctggtatcactg
agcacgctggatcgcaattttgatgcgctgggcgacgcgacgcacatcatcggttccggc
ccgttcgtggtcagcaaggaaacgctcggtcgtgaagtcgatctgacggcgcgcaaagat
tacaactgggggccgaaaaacctcaaacagcagggtcgcgctaatctcgacgtcatcaaa
gtgatcgtcaccggtgaagacagcgtgcgtatcggcgcgctgctggccggtcaggcagat
ttcatccgtcaggttcaggcgtatgacgagaagcaggccaaagaccagaacttcccgatt
tatgccgcgccaaccaaaggcgtgaacgacagtatttcgttccgtccggacaacgcgctg
gtgtctgatctgaaagtccgtcaggcgctgctgcacgccaccaacagcaaacaggtggtc
gaaacgctgttctcgccaaactatccgcaggccacgtccgtcatcgccaaaacggctgcc
ggttacgtggatctgagcaacaaactcacttatgacccgacgctgtcgaaaaagctgctg
gacgaagcgggctggaaaccgggcccgaacggcctgcgccagaaagacggcaaaacgctg
tcactgaccatttatgaatccctgccgcaaccacagaacaaagaagtcttgcagctgatt
tcgcagcagtggaatcaggtcggcgcgaagctgaacatcctggccggtgacgcgggcagc
cgcgtagccgacaacctggatccggaaaaaacgccggcgaacgtggtggaagtcggccgc
gccgatccggacgtcatcaaaagctccttctacccgaccaaccgcgatgcgctgctgcaa
aaaggcggcctgagcagcaaggtgaaaagcttccgtgacgacaaactgaatgacctgctg
gtggcaatttcagccgaagtagatccgaaaaaacgtctggcgctggccggtgacgtgcag
aactacctgctcgatcaggcttacgtcattccgattttcgaagagccacaagtttatgcc
ggagcaccttactttaaaggcgtgagctttgaagccgttggccgtccaagcttctacgcc
gcatggcttgaaaagcactaa
DBGET
integrated database retrieval system
