Rahnella sikkimica: BV494_10245
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Entry
BV494_10245 CDS
T05331
Name
(GenBank) LysR family transcriptional regulator
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_10245
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BV494_10245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AVF35287
UniProt:
A0A2L1UQV9
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Position
complement(2237603..2238499)
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AA seq
298 aa
AA seq
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MASQIKMHQLRAFVSVARQGSIRAASRLLNLSQPALTKSIKELEEGLGARLFVRRRQGVT
LTDCGDAFFKRASLILEELRVAQEDIAQRLGGTSGRVNIGVGASIARTIMPDVIDRFHRE
FPNVKVRIAEGQLVSMIPELRQGELDFTVNTYYQGPFDNELLYEKLMDKEYRVVARRGHP
MQNARSMKELLHCDWTMPTPRGSYYKLLSEVFSEMDAEPNISVICETFMSCTSLIAKTDF
LSVLSVDVINDPVIGQSLVALDLDLPLPAATFYLIQRRDTTLSPMAAHLAQLFRLYCR
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaaataaaaatgcatcagttgcgggcgttcgtgtctgtggcgcgtcagggc
agcattcgcgctgccagccgtttgcttaatctttcccagcccgcgctgaccaaatcgatt
aaagagctggaagaagggctgggcgcgagattatttgtccgccgccgtcagggcgtgaca
ctaaccgattgtggtgacgcgttttttaaacgcgcgagcctgattctggaagagcttcgc
gtggcgcaggaagacatcgcccagcgccttggcggtaccagcggcagggtgaatatcggc
gtcggtgccagcattgcgcgcaccatcatgccggacgtgatcgaccgttttcaccgggaa
ttcccgaatgtgaaagtgcgtatcgccgaaggccaactggtctcgatgatccccgaactg
cgtcagggggagctggatttcaccgtcaatacctattatcaggggccctttgataacgaa
ctgttatacgaaaaactgatggataaagagtaccgcgtggtcgccagacgcggccacccg
atgcaaaacgcgcgttcgatgaaagaattgcttcactgcgactggaccatgccgacgccg
cgcggaagttattacaaactgctcagcgaagtgtttagcgagatggacgccgagccgaat
atcagcgtgatttgcgagacgtttatgtcctgcaccagcctgattgctaaaaccgatttc
ctcagcgtgctatccgtggatgtgattaatgacccggtgatcggccagagtctggtggcg
ctcgatctggatctgccgctgccagccgcaacgttctatctcattcagcggcgtgatacc
acactgtcgccgatggcggcacatctggcgcaacttttccggttgtattgccggtaa
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