KEGG   Rahnella sikkimica: BV494_11850
Entry
BV494_11850       CDS       T05331                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rox03032]
    BV494_11850
   03036 Chromosome and associated proteins [BR:rox03036]
    BV494_11850
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_11850
DNA replication proteins [BR:rox03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BV494_11850
Chromosome and associated proteins [BR:rox03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BV494_11850
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BV494_11850
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AVF35578
UniProt: A0A2L1URZ1
LinkDB
Position
complement(2566004..2566279)
AA seq 91 aa
MNKSQLIDKIAAGADISKAAAGRVLDAVLASVTDTLKAGDEVALVGFGTFSVRERSARTG
RNPQTGKEISIAAAKVPGFRAGKALKDAVNG
NT seq 276 nt   +upstreamnt  +downstreamnt
gtgaataagtcacaattgatcgacaaaattgctgccggtgctgatatttctaaagccgca
gcgggacgtgttttggatgctgttcttgcatctgtcactgacaccctgaaagctggggat
gaagtcgctctggttggtttcggtactttctcagtgcgtgaacgttcagcacgtaccggc
cgtaacccgcagaccggtaaagaaatcagtattgcagcagctaaagtgcctggcttccgt
gcaggtaaagcgctgaaagatgccgttaacggttaa

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