Rahnella sikkimica: BV494_11850
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Entry
BV494_11850 CDS
T05331
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rox03032
]
BV494_11850
03036 Chromosome and associated proteins [BR:
rox03036
]
BV494_11850
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_11850
DNA replication proteins [BR:
rox03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BV494_11850
Chromosome and associated proteins [BR:
rox03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BV494_11850
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BV494_11850
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AVF35578
UniProt:
A0A2L1URZ1
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All DBs
Position
complement(2566004..2566279)
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AA seq
91 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRVLDAVLASVTDTLKAGDEVALVGFGTFSVRERSARTG
RNPQTGKEISIAAAKVPGFRAGKALKDAVNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaattgatcgacaaaattgctgccggtgctgatatttctaaagccgca
gcgggacgtgttttggatgctgttcttgcatctgtcactgacaccctgaaagctggggat
gaagtcgctctggttggtttcggtactttctcagtgcgtgaacgttcagcacgtaccggc
cgtaacccgcagaccggtaaagaaatcagtattgcagcagctaaagtgcctggcttccgt
gcaggtaaagcgctgaaagatgccgttaacggttaa
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