Rahnella sikkimica: BV494_12075
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Entry
BV494_12075 CDS
T05331
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_12075
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BV494_12075
Archaeal homologous recombinant proteins
BV494_12075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AVF35619
UniProt:
A0A2L1URN5
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Position
2615122..2616360
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AA seq
412 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLTGQVQRHQVDAVIVAGDIFDTGSPPSYAR
ELYNRFVVELQQTGCQLVVLAGNHDSVATLNESRELLSCLNTRVIATVGENLDEQVLVLN
TREGQPGAVLCAIPFLRPRDLLASQAGQSGSDKQLALQEAIAAHYDALYQAALAKRQELG
VPLPIIATGHLTTVGVSTSDSVRDIYIGTLDAFPAQAFPPVDYVALGHIHRAQCVAKTQH
IRYSGSPIALSFDELSKTKSVYLLDFDGATLNAIDTLEIPVFQPMQIIKGSLADIEKQLT
QFADGDAGKPVWLDIEVATQDYLSDIQRRIQALTADLPVEVVLLRRSKEQRISGIEQQEK
ETLSELSVSDVFERRLAQETDPDEPRQARMRTLFAQVVSQVTRGESAEDAAQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccatacctccgactggcacctcggccagtacttttttaccaagagccgc
gccgctgaacatcaggcttttttgcgctggctgaccggtcaggtgcagcgacatcaggtg
gacgccgtgattgtcgccggggacatttttgataccggctcgccgcccagctacgcccgc
gagttgtataaccgcttcgtggtggagttacagcaaaccggctgccagctggtggtgctg
gccggaaatcacgattccgtcgccacgctcaatgaatcccgcgagctgctttcgtgcctg
aatacgcgggtgatcgccaccgtgggcgaaaatctggatgaacaggttttggtgctgaac
acacgcgaaggccagcccggtgcggtgttgtgtgcgattccttttttgcgtccgcgcgat
ttactggccagtcaggccggtcagtccggcagcgacaaacagctcgccttgcaggaagcc
attgcggcgcattatgacgcgctgtatcaggccgcgctggctaagcgtcaggaactgggt
gtgccgctgcccattatcgccaccggccatctgaccaccgtcggcgtcagcacgtcggac
tccgtgcgcgacatctatataggcacgctcgacgccttcccggcgcaggcctttccgccg
gtggattacgtggcgctcgggcatattcaccgcgcccagtgtgtcgcaaaaacccaacat
atccgttacagcggctcgccgattgcactgagtttcgatgagctcagtaaaaccaaaagc
gtttacctgctcgatttcgacggcgctacgcttaacgccatcgacacgctggaaatcccc
gttttccagccgatgcagatcatcaaaggttccctcgcagacatcgaaaaacaactgacg
cagtttgctgacggcgatgccggtaaaccggtctggctggatatcgaagtcgccacacag
gattatctcagtgatattcagcggcgtattcaggcgctcaccgcagatttgccggtggaa
gtggttctgctgcgccggagtaaagaacaacgcatcagcggcatcgaacaacaggaaaaa
gaaacgctcagcgaactgagtgtcagcgacgtgttcgaacggcggctggcgcaggaaacc
gatcccgacgaaccgcgtcaggcgcggatgcgcacgctgttcgctcaggttgtcagtcag
gtcactcgcggcgagtccgcagaggatgccgcccaatga
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