Rahnella sikkimica: BV494_12290
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Entry
BV494_12290 CDS
T05331
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rox
Rahnella sikkimica
Pathway
rox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BV494_12290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_12290
Enzymes [BR:
rox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BV494_12290
DNA repair and recombination proteins [BR:
rox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BV494_12290
Prokaryotic type
BV494_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVF35659
UniProt:
A0A2L1URS3
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All DBs
Position
2660791..2661477
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AA seq
228 aa
AA seq
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MSTTLTWHDVIGQEKDQPYFVDTLKFVAAERAAGKTIYPPQQDVFNAFRSAELADVKVVI
LGQDPYHGPNQAHGLSFSVRPGIPAPPSLVNMYKELATDIPGFERPAHGYLQSWADQGVL
LLNTVLTVEGGQAHSHAKLGWETFTDRVIAALNENREGIVFLLWGSHAQKKGNIIDRNRH
HVLKAPHPSPLSAHRGFLGCKHFSQANELLGQQGLAPIDWMPVLPATE
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccacaactctcacctggcatgacgtcatcggccaggaaaaagaccagccttacttt
gttgatacattgaaatttgtcgccgcagaacgcgcggcgggaaaaacgatttatccgccc
cagcaggatgtttttaacgccttccgatccgctgaacttgccgatgtaaaagtcgttatt
ctggggcaagatccctatcacggcccgaatcaggcgcacgggttgtccttctcggttcgc
cctggcattcccgcaccgccttcactcgtgaatatgtataaagagctggcgacggatatc
cccggttttgagcgtcctgctcacggctatttgcagagctgggccgatcagggcgtgctt
ttgcttaatacggtgttaacggtggaaggcggacaggcacattcccatgccaagctgggt
tgggaaaccttcaccgatcgggtaatcgcagcactgaatgaaaaccgtgagggaattgtg
tttttgctgtggggatctcatgcccagaaaaaaggcaatatcattgaccgcaaccgtcac
cacgtattgaaagcgccccacccttctccgctttctgcgcatcgtggttttctgggctgt
aagcatttttctcaggctaacgaattgcttggccaacaaggtctggcacccatcgactgg
atgcctgttttgccggcaacggaatag
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