Rahnella sikkimica: BV494_12355
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Entry
BV494_12355 CDS
T05331
Name
(GenBank) transcriptional regulator
KO
K02436
DeoR family transcriptional regulator, galactitol utilization operon repressor
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_12355
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BV494_12355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
CoA_trans
GntR
HTH_PafC
FeoC
Motif
Other DBs
NCBI-ProteinID:
AVF35669
UniProt:
A0A2L1URT2
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All DBs
Position
complement(2669826..2670608)
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AA seq
260 aa
AA seq
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MNTYDRRNKIIDLVNQNGSVMVADLSSSFDVSEVTIRSDLGLLEQKGALTRFHGGAAKRD
ASPADQVALPQDEMVLEERYLQASDPKKRIAQAAAGLVKPGDTVILDSGSTTMLLAEELV
KSGDITVITNNLPAAFVLSENPDITLVVCGGTLRHKTRSLHGNITEYALQGIVANLMFVG
ADGLDAATGITTFNEGYSISGIMAAAAQRVVVVTDSTKFGRRGYNLVLPIEKIDTIITDK
DIRDEALQALRQTSAELMLV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttatgatagacgtaacaaaatcattgatttagtgaatcaaaacggcagcgtt
atggttgccgacctttcgagttctttcgacgtttccgaagtgacaatccgctctgactta
ggattgctggagcaaaagggtgccctcacacgtttccacggcggtgcggcgaaacgcgat
gcttcaccggccgaccaggtggcattgccgcaggatgaaatggtgcttgaagagcgctat
cttcaggccagtgaccctaaaaaacgcatcgctcaggcggctgcaggactggtgaaaccc
ggagataccgtcattctcgatagcggcagtactaccatgctgctggcagaagagctggtg
aagtcaggtgatatcaccgtcatcacgaacaatttgcctgctgcatttgttttgtctgaa
aaccccgatatcacactggtggtctgtggcggaacgctgcgacataaaacgcgctctttg
catggcaatattacggaatacgccttgcagggaatcgtcgctaatctgatgtttgtgggc
gcagatggcctggacgccgcgacaggcatcaccacatttaatgagggctacagcatcagc
ggtattatggctgctgccgctcagcgcgttgtcgttgtcactgattccacaaagtttggt
cgtcgcggatacaacctggtgttgccgatagaaaaaatcgacacgattattacggacaag
gatatccgtgatgaagctttgcaggcactcaggcagacgtcggcggaactcatgttggta
taa
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