KEGG   Rahnella sikkimica: BV494_13020
Entry
BV494_13020       CDS       T05331                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_13020
Enzymes [BR:rox01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     BV494_13020
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    BV494_13020
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: AVF35791
UniProt: A0A2L1US74
LinkDB
Position
complement(2811250..2811903)
AA seq 217 aa
MNLDLFDHPDFHPHWREDLFPGAVVLRGVARENDTALLAEIDRIAGLVPFQYRATPGGYA
MSVAMTNCGDVGWVTDKAGYRYQTTSPESQQHWPAMPELFREIAVQAAEQAGFPGFNPDA
CLINRYQPGAKMSLHQDKDEHDFGQPIVSISLGLPAVFQFGGLERSDKTQRITLTHGDIV
VWGGPSRLRYHGVLPLKAGEHPLTGSYRFNLTFRKAV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgaatttggatctttttgatcatcccgatttccacccgcactggcgcgaagatcttttc
cccggcgcggtggtgctgcgtggcgtggcgcgggaaaacgatacggcgctgctggcggag
atcgaccggatcgccgggctggtgccttttcagtatcgcgcgacgccgggcggttatgcg
atgtccgtggcgatgaccaactgcggcgatgttggctgggtaaccgataaagccggttac
cggtatcagaccacgtcgccggaaagccagcagcattggcccgccatgcccgaactgttt
cgtgaaatcgcggtgcaggccgcagagcaggccggtttccccggttttaatccggatgcc
tgcctgattaaccggtatcagccgggcgcaaaaatgagcctgcatcaggacaaagacgag
catgacttcgggcagccgattgtctcgatttctctcggattaccggcggtgtttcagttt
ggcgggctggagcgcagcgacaaaacgcagcgcatcacgctgacgcacggcgatatcgtg
gtgtggggcggcccgtcgcggctgcgttatcacggcgttttgccgctgaaagcgggcgaa
catccgctcaccggttcgtaccggtttaacctgacgttccggaaagcggtataa

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