KEGG   Rahnella sikkimica: BV494_13145
Entry
BV494_13145       CDS       T05331                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rox  Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:rox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rox03016]
    BV494_13145
Enzymes [BR:rox01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BV494_13145
Transfer RNA biogenesis [BR:rox03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BV494_13145
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AVF35815
UniProt: A0A2L1US99
LinkDB
Position
2846274..2846816
AA seq 180 aa
MSVERRLFFALSLPAKLQKQVIKWRAEHFPQDTGRPVTAANLHITLAFLGEISELKAGAL
TRIAGRIQAQKFSLCLDDIGHWPGSGVVWIGTKRAPNALLQLASVLRSHAARNGCHQSTL
PFHPHVSLYRSATRPVAIPPATPDWQLEAEDFSLYESTYERGRTRYRCLQSWPLADIPAT
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtctgtcgagcgccgcctgtttttcgctttatcgttacctgcaaagttacaaaagcag
gtcatcaaatggcgtgccgaacattttccgcaagacaccggccgccccgtcacggcggcg
aacctgcacattacgctggcgtttctgggcgaaatcagtgaactcaaagccggcgcgctg
acccgcatcgccggacgcattcaggcgcagaaattcagcctgtgtctggacgatatcggg
cactggccgggttccggcgtagtgtggattggtacgaagcgcgcgcccaatgcgctgctg
caactggcttccgtgctgcgctctcacgccgcccgcaacggctgccaccaaagtacgctg
ccgtttcatccgcatgtatcgctctaccgcagtgccacgcgcccggtcgccattccgccc
gccacgcctgactggcaactggaagcagaagatttcagtctgtacgaatccacttatgaa
cgcgggcgcacccgttaccgctgcctgcaaagctggcctctggctgacattccggccacc
tga

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