Rahnella sikkimica: BV494_13705
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Entry
BV494_13705 CDS
T05331
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_13705
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BV494_13705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AVF35920
UniProt:
A0A2L1USK9
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All DBs
Position
complement(2971815..2972702)
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AA seq
295 aa
AA seq
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MPHINYNHLYYFWHVCKSGSVVGAAEALYLTPQTITGQIKSLEERLGGKLFKRQGRGLVP
SELGQLVYRYADKMFTLSQEMLDIVNYRKESSLLFDVGVADALSKRLVSRVLEAAVPENA
QIHLRCFESTHEMLLEQLSLHKLDMILSDCPVDSTQQEGLFSVKLGESPISFFCCKPLDG
VDFPACLEQRPLLIPGRRSMLGRKLLNWFTTQGLNVNILGEFDDAALMKAFGMNNDAIFV
APAIYSSTEFQDEKIEEVGRVEGIMEEYYVIFAERMIQHPSVQRICHTDFSALFT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatattaattacaaccatttgtattatttttggcacgtgtgtaaatcaggttct
gttgtgggagctgccgaggcgctgtatctgaccccgcagacgatcaccggccagatcaaa
tcattggaagaaaggctcggcggaaaactctttaagcggcaggggcgcggtctcgtgcct
tcggagttgggccagctggtctatcgatatgcggacaaaatgttcacactgagccaggaa
atgctggatatcgtgaattaccgcaaagagtcgagcctgctgtttgatgtgggcgttgcg
gatgctttgtccaagcgtctggtcagccgtgtgctggaagccgccgtacctgaaaatgcg
caaattcatttacgctgttttgaatcgacgcacgaaatgctgctcgaacagctgagtttg
cataagctggatatgattctctccgactgtccggtggattccacccagcaggaagggctg
ttttcagtcaaattgggggaaagcccgatcagcttcttctgctgcaaacctctggatggc
gtagatttcccggcctgtcttgaacagcgtccactgcttattccaggccgccgttcgatg
ctggggcgtaaattgctgaactggtttacgacgcaggggctgaacgtcaatatcctcggg
gaattcgatgacgcggcgctgatgaaagcattcggcatgaacaacgatgccatttttgtc
gcaccggccatctactcttcgacggaatttcaggatgagaaaattgaagaggttgggcgg
gtagaggggatcatggaagagtattacgtgatttttgctgaaagaatgatccaacatcct
tcggtacagcggatttgtcacaccgacttttcggcattgtttacttga
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