Rahnella sikkimica: BV494_13855
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Entry
BV494_13855 CDS
T05331
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_13855
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BV494_13855
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_22
RecA_N
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
Rad51
AAA
AAA_14
AAA_16
NTPase_1
nSTAND_NTPase5
nSTAND3
AAA_24
cobW
Zn_ribbon_Thio2
Viral_helicase1
T2SSE
NPHP3_N
AAA_30
AAA_29
DZR
Zeta_toxin
EryCIII-like_N
tRNA-synt_1f
PAXNEB
Herpes_Helicase
DUF1541
Motif
Other DBs
NCBI-ProteinID:
AVF35948
UniProt:
A0A2L1UT02
LinkDB
All DBs
Position
complement(3009080..3010462)
Genome browser
AA seq
460 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACQAWNSITEIRLAASPTVARNERLTGYAGDAGV
SRVQKLSDISLDELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQILCHLS
EHMKTLYVTGEESLQQVAMRAHRLGLPTSNMNMLSETSIEQICEIADKEQPKLMVIDSIQ
VMHMADIQSSPGTVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSV
MVLWEGTRPLLVEVQALVDHSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVTETSADLALLLSLVSSLRDRPLPHDLVVFGEVGLAGEIRPVPSGQERITEAA
KHGFKRAIVPHANVPKKVPAGMQVFGVKKLADALAILDDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaagcagcaaaacgtgcatttgtgtgtaatgaatgtggcgcagattatccgcgc
tggcaggggcagtgcagtgcgtgtcaggcctggaacagcattactgaaatccgtttagcg
gcttccccgactgttgcgcgcaacgagcgtctgaccggttacgcgggtgatgcgggcgtc
agccgtgtgcaaaaactctctgatatcagcctcgatgaacttccgcgtttcagcaccggt
ttcaaggaattcgaccgcgtgctgggcggcggcgtggtgcccggaagtgcaattcttatc
ggcggtaatccgggcgcggggaaaagtacgctgttgctgcaaattttgtgtcacctcagc
gaacacatgaaaaccctctacgtcaccggggaagaatcactgcaacaggtggcgatgcgc
gcgcaccgtctgggtttaccgacgtcgaacatgaatatgttgtcggaaaccagcatcgaa
caaatctgcgaaattgctgacaaagaacagccgaaactgatggtgatcgactccattcag
gtgatgcatatggcggacattcagtcatcgccgggcacggtcgcacaggtgcgcgaaacc
gccgcctatctcacccgctttgcaaaaacgcgcggcgtggcgatcgtgatggtcggccac
gtcaccaaagacggctcgctggctggcccgaaagtgctcgaacactgcatcgactgttcc
gttctgctcgacggcgatgccgactcccgtttccgtaccttgcgcagccataaaaaccgc
ttcggcgccgtgaatgaactgggtgtattcgccatgaccgaacagggtctgcgcgaagtc
agtaatccgtctgctattttcctgagccgtggcgatgaaattacgtcgggcagttcggtg
atggtgctgtgggaagggacgcggcccttgctggttgaagtgcaggcgctggtagatcac
tcaatgatgggcaatccgcgtcgcgtagccgtcgggctcgagcaaaaccggctggcgatt
ctgctggcggttctgcaccgtcacggcggtttgcagatggcggatcaggacgtgtttgtg
aacgtcgtgggcggcgtgaaagtgacggaaaccagcgcagatctcgcgctgttgctgtcc
ctggtctccagcctgcgtgaccgcccgttaccacacgatttggtggtgtttggcgaagtg
gggcttgcgggggaaatccgtccggtacccagcggtcaggaacgtatcaccgaagcggcg
aagcacggatttaaacgcgctattgtgccgcatgccaacgtgccgaaaaaagtccctgcc
ggaatgcaggtgtttggagtcaaaaaactggccgatgcgctggcaatcctcgacgatttg
taa
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