Rahnella sikkimica: BV494_14305
Help
Entry
BV494_14305 CDS
T05331
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rox03016
]
BV494_14305
Enzymes [BR:
rox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BV494_14305
Transfer RNA biogenesis [BR:
rox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BV494_14305
Prokaryotic type
BV494_14305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AVF36028
UniProt:
A0A2L1UT83
LinkDB
All DBs
Position
complement(3110672..3111616)
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKSIGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPLCLG
EATKFSRFLLDSDKRYRVIARMGQRTDTSDAEGAIISEREVAFSQQQLDDALDSFRGETQ
QIPSMYSALKYEGKKLYEYARQGIEVPRESRSITVYELTFIRWEGFEVELEIHCSKGTYI
RTIVDDLGEKLGCGAHVTYLRRLQVATYPSERMVTMEKLHELIAQAEEQGIEPRLLLDPL
LLPMDSACEDFPEVNLLPVVAGYVKQGQPVQASGAPTSGMVRITEGEERKFIGVGEIDDD
GRIAPRRLVVEYTD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcccacgtcgccgcggccgtgacatacacggcgttctgctactggacaaatca
attggcttgtcttccaacgatgccctgcaaaaggttaaacgtctttacaacgctaaccgc
gcagggcataccggtgcgctcgacccgctggccactggcatgttgccgctgtgcttaggt
gaagccaccaaattttcacgattcttgctcgattccgataaacgttatcgcgttatcgcc
cgcatgggacagcgcacggacacctctgacgcagaaggtgccattatttccgaacgtgaa
gtggccttcagtcagcagcaacttgacgacgcactcgacagcttccgcggggaaacccag
cagattccttccatgtattccgcactgaaatacgaagggaagaagctttatgagtacgca
cgtcagggcattgaagttccgcgtgaatcgcgcagcatcacagtgtatgaactgacgttc
atccgctgggaaggttttgaagttgagctggaaattcactgctcaaaaggtacctatatc
cgaacgattgtcgacgatctcggcgaaaagttagggtgtggggcgcacgtaacgtatctg
cgccgtttgcaggtcgcaacttatccttctgagcgtatggtcacaatggaaaaactccat
gaactgattgctcaggcagaagagcagggcatagagccacgtcttttgctggatccgttg
ttgttaccgatggacagcgcatgtgaagacttcccggaagtgaatctgttgcccgtggtg
gccggatatgtgaaacagggtcaacctgttcaggcatcgggtgcgcccacgagtggtatg
gttcgcatcaccgaaggcgaagaacgtaagtttatcggtgtgggcgaaatagatgatgat
ggccgcattgcgccgcgtcgtttagtcgtcgaatacacggattaa
DBGET
integrated database retrieval system
