Rahnella sikkimica: BV494_14670
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Entry
BV494_14670 CDS
T05331
Name
(GenBank) miniconductance mechanosensitive channel MscM
KO
K22051
miniconductance mechanosensitive channel
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_14670
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_14670
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MscS_porin
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
AVF36095
UniProt:
A0A2L1UT31
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Position
3185097..3188465
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AA seq
1122 aa
AA seq
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MRLIPALLMSLLLALPLAATATPTEDQLKQELKQAEANKEMANQTQVVEALQSALNWLNE
LNVSAGRTTQYQAVIDDFPKLTQALRLELQNQPDKPPAVDDTIPAAQLEQQILQVSSQQL
EETRQLRQEQDRFRDISDSVSQIPQQQTEARNALSDIEQRMQAAMAAAASSPLAQAQLSA
LQAESAARKAKVDELELAQLSANNRQELSRLRADLYKKRADFLDQQLQALRNMLNNQRQR
EAEQALEKTELLAEQSGELPHSISQQLQSNRELSLALNQQAQRMDLISSQQRQAAAQTQQ
VRQAINTIREQAQWLGASNLLGETLRAQVSRLPDMPKPQQLDRDMAQLRVQRLHYEDLLD
KQAIYRQGRQDDGKPLTAAQQKILDAQLRTQRDLLNSLLSGCDTQILELTKLKVANSQLV
EALNDVHDAAHRYLFWVADVSPIGFSYPMQVAHDLKRLVSLDSLSQLGGASMMMVTSKET
LLPLFGALILVIISISSRKHYYAFLARASSKVGKVTQDHFSLTMRTVFWSILVAMPLPVL
WAALGFGLQSAWPYPIAVAIGDGVTATLPILWAFMVSAALANPQGLFVAHFGWPQRAVSR
ALRYYALSIWVMVPLIMALITFDNLNDREFSNTLGRLCFVILCLVVALVTHSLKRAGIPL
YHDKHGNSENVLNNTLWWMMLGAPLVAALASLMGFLATSQALLARLETSVAIWFVLLVIY
HIIRRWMLIQRRRIAFERAKQRRAEMLNQRARGEEEGHHANSSNEGTVEIEEPVVDLDAI
SAQSLRLVRSLLTLIALISVIFLWSEIHSAFSFLENIHLWQVSSTVQGVESMQPITLGSV
LIAILVLIITTQLVRNLPALLELALLQHLDLTPGTGYAVLTITKYVLLLIGGLVGFSLIG
IEWAKLQWLVAALGVGLGFGLQEIFANFISGLIILFEKPIRIGDTVTIRNLTGSITKINT
RATTIADWDRKEIIVPNKAFITEQFINWSLSDSVTRVVLTVPAPSEANSEEVTQILLNAA
HRCSLVLDMPAPEAYLVDLQQGIQIFELRMHAAEMAHRMPLRHEIHQLILAGFREHGITL
PFPPFQVRMETLHRAQNGNNATFTSSSGSGRSGNSSRSPGDL
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatccccgccctgctgatgagtttattgctggccctgcctctggcggcgaca
gcaaccccgaccgaagatcagcttaagcaagagctgaaacaggcggaagccaataaagaa
atggccaatcagacgcaggtggttgaggcgctgcagagtgcgctcaactggctgaatgag
ttgaatgtgtcggccgggcgcaccacgcaataccaggcggtcattgatgattttccaaaa
ctgacgcaagcattgcggctcgagctgcaaaaccagcccgataagccgccagccgttgat
gacactattcctgccgctcagcttgagcagcaaattttgcaggtcagcagccagcaactg
gaagaaacccgccagctgcgtcaggaacaggaccgcttccgcgatatcagcgactcagtc
agccagatcccacaacagcaaaccgaagcccggaatgcgctcagcgatattgagcagcgc
atgcaggcggccatggcagcagcggcatcttcaccgctggcacaggcgcaactcagcgca
cttcaggccgaatcagcggcacgcaaagccaaggttgatgaactggagctggcgcagctt
tctgccaacaaccggcaggaactttcacgacttcgcgccgatctctacaaaaaacgcgcc
gattttctcgatcagcagttgcaggctttacgcaatatgctcaacaaccagcgccagcgc
gaagcggaacaggcactggaaaaaaccgagctgttagctgaacaaagcggtgagcttccg
cattccatcagccagcagttgcagtcgaaccgcgagctgtcgctggcgctgaatcagcag
gcgcagcgcatggatctgatttcctcgcagcagcgtcaggcggccgcgcagacacagcag
gttcgtcaggcgattaacactatccgcgagcaggcgcagtggctgggtgcatcaaatctg
ctgggcgaaacactcagggcgcaggtttcccgcctgccggacatgcctaaaccgcaacag
cttgaccgtgatatggcgcagttgcgcgtccagcgcctgcattatgaagatttactggat
aagcaggcgatctaccgtcagggacgtcaggacgatggcaaaccgctgacggcagcgcag
caaaaaatcctggatgcccagctgcggactcagcgtgatttactcaattcgctgctctcc
ggctgcgatacgcaaattcttgaactgaccaaactgaaagtcgccaacagccagctggtg
gaagcgctgaatgacgtgcatgacgccgcgcaccgctatctgttctgggtcgccgatgtg
agcccgattggtttttcctatccgatgcaggttgcccatgatctgaaacgactggtttca
cttgattccctgagccagttgggcggcgcatccatgatgatggtcaccagcaaagaaacg
ttgctgccgctgtttggcgcgctgattctggtgattatcagcatcagttcccgcaagcac
tattacgcatttctggcgcgtgccagcagcaaagttggcaaagtcacacaagaccacttt
tcactgacgatgcgcacggtgttctggtcaattctggtggctatgccgttgccggtactg
tgggcggcgttaggcttcgggttacaaagtgcctggccttatccgatagccgtcgccatt
ggcgatggcgtaaccgcgacgttgccgatcctctgggcgtttatggtcagcgccgcgctg
gcgaatcctcaggggctgtttgtagcgcactttggctggccgcagcgcgccgtctcacgg
gcgttgcgttactacgccctgtccatctgggtgatggtgccgctgattatggcgctgatt
accttcgataatctgaatgaccgcgaattctccaatacgcttggccgcctgtgtttcgtc
attctctgtctggtggtcgcgctggtcacacacagcctcaaacgcgcgggcattccgctt
taccacgataaacacggcaacagcgaaaacgtcctcaataatacgctgtggtggatgatg
ctgggcgcaccactcgtggctgcgctggcctcgctgatgggcttcctcgcgacgtcacag
gcgctgctggcgcgtctggaaacctcggtcgccatctggtttgttctgctggtgatttac
cacattatccgccgctggatgctcattcagcgtcgtcgcatcgcttttgagcgcgcaaaa
cagcgccgtgctgaaatgctgaaccagcgcgctcgcggtgaagaagaggggcatcacgcc
aacagcagtaatgaaggcacggtggaaatcgaagaaccggtggtcgatctggatgcgatc
tccgcgcagtcattgcggctggtgcgatccctgctgacgttgatcgcgctgatctcggtg
atcttcctgtggtcggaaatccactccgcgttttctttcctggaaaatattcatctgtgg
caggtttcctcgaccgttcagggcgtggaaagcatgcagccgatcacgctcggatccgtg
ttgatcgccattctggtgctgattattaccacgcagctggtgcgtaatttacccgccctg
ctggaactggcgctgctgcaacatctggacctgacgccgggcaccggttacgcggtactg
accatcaccaaatacgttttgctgctgattggcgggctggtgggcttttcgcttatcggg
atcgaatgggcaaaactgcaatggctggtcgccgcattgggtgtcgggctgggctttggt
ttgcaggaaattttcgctaacttcatttccggcctgatcattctgttcgaaaagccgatc
cgtatcggcgataccgtcaccatccgcaacctgaccggcagcatcacgaaaatcaatacg
cgcgccacgacgattgccgactgggaccgcaaagaaattatcgtgccgaacaaagccttt
atcaccgagcagttcatcaactggtcgctttccgattcggtcacgcgtgtcgtgctgacc
gttccggcaccatcggaagccaacagtgaagaagtgacgcaaatcctgcttaacgccgcg
caccgctgttcgctggtgctggatatgcctgcgccggaagcgtatctggtggatttacaa
caggggattcagatcttcgaactgcgtatgcatgccgctgaaatggcgcaccgtatgcca
cttcgtcacgaaatccaccagctgattctggccgggttccgcgagcacggcattacgctg
ccgttccctccgttccaggtccgtatggaaacgctgcaccgggcgcagaatggcaataat
gcgacgtttaccagcagcagcggcagtggacgcagcggtaacagctcgcgttcgccgggc
gatttgtaa
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