Rahnella sikkimica: BV494_15505
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Entry
BV494_15505 CDS
T05331
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_15505
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BV494_15505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_23
HTH_29
Porphobil_deam
HTH_8
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AVF36245
UniProt:
A0A2L1UTH7
LinkDB
All DBs
Position
3352590..3353510
Genome browser
AA seq
306 aa
AA seq
DB search
MIDSEITFRKLEIFLAYMEKQNITRAAEQLGLSSVSVHRALHSLEEGLRCPLFVHRGRNL
LPLPAAEALLEHATQVIEQMEHGILATQRAAGFGDKRLKVGTLYSLTLETIPRLIMGLKM
RRPELELELVMGSNNDLLQKLEDGQLDAILISTSDSSVDAQRYDQLPLFQDDIFLAAPAS
SDLACEGTADLRDFKQKKFVSLAEGFATYHGFQEAFQVAGFEPDIVTRVNDIFSMLSLVQ
AGVGYTLIPGRMKGVYENTVRLLPLAEAYQMRQTIALVFPHSREHDPNLLALAAESRMYA
LASRKR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagtgaaattaccttccggaaacttgaaattttcctcgcctacatggaaaag
caaaacatcacccgcgcagccgaacaactcggtctgagcagcgtcagcgtgcatcgcgcc
ctgcattcgctggaagaaggtttgcgctgtccgctgtttgtccatcgcggccgtaacctg
ctgccgctgcctgccgctgaggcattgctggagcacgccacacaagtcatcgagcagatg
gagcacggtattttagccacgcagcgcgccgccggttttggcgataagcggcttaaagtg
ggtacgctctattcgctgacgctggaaaccattccccgtttaatcatggggctgaaaatg
cggcgtccggaacttgagctggaactggtgatgggctcgaacaacgacctgctgcaaaag
ctggaagacggacagctggatgcaattctgatttccaccagcgattccagcgtcgatgcc
cagcgttacgatcagcttcccctgtttcaggacgatattttcctcgccgcgcccgccagt
tccgatctggcgtgcgaaggcaccgctgatttacgcgatttcaaacagaagaaatttgtc
tcgctggcggaaggtttcgcgacttatcacggatttcaggaagcttttcaggtggctggg
ttcgaaccggatatcgtcacccgcgtgaacgatattttctcgatgctgagcctggtgcag
gcgggcgtcgggtacacgctgatccccggcaggatgaaaggggtgtatgaaaatacggtc
cggctgttgccactggccgaagcctaccagatgcgccagaccatcgcgctggtgttcccg
cacagccgcgaacacgatccgaatttactcgcgctggcggcagagagccggatgtatgcg
ctagcgagccgcaagcgctga
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