Rahnella sikkimica: BV494_16065
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Entry
BV494_16065 CDS
T05331
Name
(GenBank) transcriptional regulator EbgR
KO
K12113
LacI family transcriptional regulator, ebg operon repressor
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_16065
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BV494_16065
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
HTH_7
HTH_Tnp_ISL3
HTH_23
Sigma70_r4
Trp_repressor
MarR
HTH_IclR
HTH_38
HTH_24
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AVF37470
UniProt:
A0A2L1UX08
LinkDB
All DBs
Position
3480285..3481265
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AA seq
326 aa
AA seq
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MATLKEIAEAANVSVATVSRVLNDDPSLSVKAQTRQKILEAAERLEYKLSPSKRNATHRM
TFAALFTYRQGLEIDDPYYLSMRYGIETQCEKLGVTLISGYDFTGDKPLPAADGFLVIGQ
PQTALHTQLSQQSSPVVFIDGVMEDPQFDCVNVDLFKISQKVIDFFIGQGYSRIGFIGGR
DLPEFADQREQAFVEYGRLKNVVQPQDIYYGDFTSQSGYQCAKKMLQENTPFPPALLIAT
DTIALGVTRALLEHGVKIPEQIALISVNDIPTARFVFPSLSTVRIQSETMGAQAVNLLTE
RLRDERSVPLSVFVPSALQLRDTTRR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgaaggaaatcgctgaggccgcgaacgtatccgttgcgacggtttcacgc
gtgctaaatgacgatccgagcctgagcgtgaaagcgcaaacccggcagaagattttagaa
gcggcagaacgcctggaatataaactgtcgccgtccaaacgtaacgccacgcaccggatg
accttcgccgcgcttttcacctaccgtcaggggctggaaatcgacgacccttactacctt
tccatgcgttatggcattgaaacgcagtgcgaaaaactcggcgttaccctcatttctggc
tatgacttcaccggcgataaaccgctgcctgccgccgacggttttctggttatcggccag
ccgcaaacggcgctgcacactcagctcagtcagcaatccagcccggtggttttcattgat
ggcgtgatggaagacccacagttcgactgcgtaaacgttgatctctttaagatcagccag
aaagtgatcgacttctttatcggtcagggctattcgcggatcggttttatcggcgggcgc
gatctcccggaatttgccgaccagcgcgaacaggcgtttgtggaatatggccgcctgaaa
aacgtcgtccagccgcaagatatttattacggcgatttcaccagccagtccggctaccag
tgcgcgaagaaaatgttgcaggagaacacgccgtttcctccggcgctgctgatcgccacc
gacaccatagcgctgggcgtgacccgcgcgctgctggaacacggcgtgaaaatcccggag
caaatcgcgctgatcagcgtcaacgatatcccgaccgcacgctttgttttcccttcttta
tcaacggttcgcatccagtccgaaaccatgggcgcgcaggccgttaacctgctgaccgaa
cgtctgcgtgatgaacgcagcgtcccgctttccgtgtttgtacccagcgctctccagctg
cgcgacaccacccgccgctaa
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