Rahnella sikkimica: BV494_16655
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Entry
BV494_16655 CDS
T05331
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rox
Rahnella sikkimica
Pathway
rox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BV494_16655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_16655
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BV494_16655
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_16
AAA_29
ABC_tran
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
AVF36457
UniProt:
A0A2L1UU89
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All DBs
Position
complement(3616716..3617804)
Genome browser
AA seq
362 aa
AA seq
DB search
MALTRLLIKDFRNIEAADLDPSPGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLLAGRV
IRHDQPEFVLHARVDDGGDRELSIGLSKSRQGDSKVRIDGSDGHKVSELAQMLPMQLITP
EGFTLLNGGPKYRRAFIDWGCFHHDPGFFIAWSNLRRLLKQRNAALRQVSRYAQIRAWDQ
ELIPLAERISEWRAAYSEAIAADISATCAQFLPEFALSFSFQRGWDKETEYGELLERNFE
RDRALTYTASGPHKADFRIRAEGTPVEDLLSRGQLKLLMCALRLAQGEFLTRQSGRRCLY
LLDDFASELDADRRRLLADRLKATQAQVFVSAISAEQVTDMMGEKGKMFRVEQGKIAVLS
QD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggccttaacgcgcttactgataaaagatttccgcaacatcgaggcggcggatttagat
ccctcgcccggttttaactttctcgtcggtcccaacggcagcggtaaaaccagcgtgctc
gaggcggtatacaccctcgggcatggccgcgcttttcgcagtttgctcgccggacgcgtt
attcgtcacgatcagcctgaatttgtgctgcatgcgcgggttgatgacggcggcgatcgt
gagttatcgattggcctgagcaaaagccgtcagggagacagtaaagtgcgcatcgacggc
agcgacggacacaaagtgtctgaactggcgcagatgttgccgatgcaacttatcacgccc
gaaggcttcaccctgcttaatggcgggccgaagtaccggcgggcgtttatcgactggggt
tgtttccatcacgatcccggtttttttatcgcctggagcaacctgagacggttactcaag
caacgcaacgccgcgttgcgacaggtgagtcgctatgcgcaaattcgtgcctgggatcag
gaactgatcccgttagccgagcgtattagcgaatggcgggcggcatacagcgaagcgatc
gcggctgatatcagcgcgacctgcgcgcaattcctgcctgaattcgccctcagtttttcg
ttccagcgtggatgggacaaagaaaccgagtatggcgagttgctggagcgtaactttgaa
cgcgacagggccttaacctataccgcatcaggtccgcacaaagcggatttccgcattcgt
gccgaaggcacgccggtggaagatttgctgtcccgtggacagctgaaattactgatgtgt
gcgctccggttagcgcagggtgagtttctcacccgacagagcgggcggcgttgcctgtat
cttcttgacgattttgcctccgagctggatgccgacagacgtcggttgctggcggatcgc
ctgaaagccacccaggcacaggtttttgtcagtgcgataagcgctgagcaagtgaccgac
atgatgggtgaaaagggcaagatgttccgcgtggaacaaggtaaaatagccgttctatca
caggactaa
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