Rahnella sikkimica: BV494_16935
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Entry
BV494_16935 CDS
T05331
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rox
Rahnella sikkimica
Pathway
rox03030
DNA replication
rox03410
Base excision repair
rox03420
Nucleotide excision repair
rox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BV494_16935
03410 Base excision repair
BV494_16935
03420 Nucleotide excision repair
BV494_16935
03440 Homologous recombination
BV494_16935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rox03032
]
BV494_16935
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_16935
Enzymes [BR:
rox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BV494_16935
DNA replication proteins [BR:
rox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BV494_16935
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BV494_16935
NER (nucleotide excision repair)
GGR (global genome repair) factors
BV494_16935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AVF36509
UniProt:
A0A2L1UU81
LinkDB
All DBs
Position
3676020..3678824
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSVGEPTGAMYGVLNMLRSLLLQYTPSHVAV
VFDAKGKTFRDELFEQYKSHRPPMPDDLRSQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPGVTLINTMNNAILGPEEVVEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYADLDKVSTLSFRGSKTMAAKLAENK
DVAYLSYQLATIKTDVKLDLTCAELTVSEPDADELHQLFGRYEFKRWLADVEAGTWLSGK
KSGVKASATSKKNAVETEVTSAEPLERNQLSQDGYVTILDQATLDEWMGYLKASDVFAFD
TETDGLDTLTANLIGLSFATEAGKAAYLPVAHDYLDAPVQLDRDDVLKQLKPLLEDEKQL
KVGQNLKFDRGILLRYDIEMKGIAYDTMLESYVLDSVSGRHDMDSLADRYLGHKTVGFEE
IAGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHQALWPRIQESESLKKVFIDIEMPLVP
VLSHIERTGVLIDQNILAAHSKELAIRLNELENKAHELAEEPFNLSSTKQLQAILYDKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPLSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKDYIILAADYSQIELRIMA
HLSKDEGLLTAFAQGKDIHRATAAEVFGTPLESVTGEQRRSAKAINFGLIYGMSAFGLSR
QLNIPRKESQRYMDLYFERYPGVLDYMERTRTQASEQGYVETLDGRRLYLPDIKSSNAMR
RKGAERAAINAPMQGTAADIIKRAMISVADWLKQPDAPRARIIMQVHDELVFEVHKDDVT
AASEKIRDLMEASMTLAVPLKVDVGTGENWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatagcagaaaaccccttaatcctggtggacggttcgtcttacctttatcgc
gcttatcacgcgttcccaccgttgactaactcagtgggcgagccaacaggtgcgatgtac
ggtgtgcttaatatgttgcgcagtttattgctgcaatacacaccaagccatgttgccgtg
gttttcgacgcgaaaggcaaaaccttccgtgacgaactttttgaacagtacaaatcccat
cgtcctccgatgcctgatgatctgcgctcgcagattgagcctttgcaccaaatggtgaaa
gccatggggttgccgctgctggtggtttccggcgtggaagctgacgacgtgatcggtact
ctggcactggaagcggaaaaggcgggccatgccgttcttatcagtaccggcgataaagat
atggcgcagctggtgacgccgggcgttacgctgattaacaccatgaataatgcgattctt
gggccagaagaagtcgttgagaaatatggtgtgccacctgaactgattattgatttcctg
gctctgatgggggattcctcggataacataccgggcgtgcctggcgtcggagagaaaaca
gcgcaagccctgttgcaggggattggcggccttgatgcgttgtatgcagaccttgataag
gtatcgacattaagcttccgtggttcgaaaaccatggctgcgaagcttgcggaaaataaa
gacgtcgcttatctgtcctatcagctggcaaccattaaaacagacgttaagctcgactta
acctgtgcagaactgaccgtttcagaacccgatgctgatgaacttcatcagctcttcggt
cgttatgaatttaaacgctggctggctgatgtggaagctggcacctggctgagcggtaaa
aaatctggtgttaaggcttctgccacctcgaaaaagaatgcagtagaaacggaagtgacc
tctgcagaacctcttgagcgcaaccagctctctcaggacggatatgtcacgattttggat
caagccactcttgatgaatggatgggttatctgaaagcttctgacgttttcgcttttgat
acagaaaccgatggtctggatacgctgacggcaaacctgattggcctgtctttcgcgaca
gaagcaggcaaagccgcttatttgccggttgctcacgattatctggacgcgccagtacaa
cttgatcgcgatgacgttcttaagcaactcaaaccgttgctggaagacgagaagcagctg
aaagtcgggcagaacctgaaattcgatcgcggcatcttgttgcgctacgacatcgaaatg
aaaggcatcgcgtacgacacaatgcttgaatcttacgttcttgacagtgtatctggccgt
catgatatggacagccttgcagatcgttacctcggtcataaaactgtgggttttgaagag
atcgcagggaaaggtaaaaatcagctgactttcaaccagatcgctctggaacaagccgcg
ccgtatgctgcggaagatgccgacgtcacgttgcaattgcatcaggcactttggccacgt
attcaggaaagtgaatcgctgaagaaagtcttcattgatattgaaatgcctctggtgcct
gtcctgtctcatatcgaacgcaccggtgtcctgattgaccagaatattttggctgctcat
tcgaaagagctggcaattcgcctgaatgagctggaaaacaaagcgcatgagctggcggaa
gaacctttcaatctttcgtcgaccaaacagcttcaggctattttgtacgacaaacagaaa
ttgccgattctgaagaaaacgccgggcggtgctccatcgacgaacgaagaagttctggcg
gaactggccctggactatccgttgccgaaagtgattttggaatatcgtggtctggcgaag
ctgaaatcaacttataccgacaaactgcctttgatgataaacccgctgtcaggccgtgtt
catacttcgtatcatcaggcggtgacggccaccggtcgtctgtcatccagtgatcccaac
ctgcaaaatattccggtgcgaaatgatgaaggccgtcgcattcggcaggcttttattgcg
ccgaaagattacatcattctggctgccgactactcgcagatagagttgcgcatcatggcg
cacttatccaaagatgaaggcctgctgaccgcgtttgcgcaaggcaaagatattcaccgt
gcgaccgcagcagaagtcttcggtacgccactggaaagcgttaccggcgaacagcgtcgc
agcgcaaaagcaattaacttcggtctgatttatggcatgagcgctttcggtttgtcccgt
cagctgaacattccccgtaaagaatctcagcgttacatggatttgtatttcgagcgctat
ccgggcgtacttgactatatggagcgcacccgcactcaggcgtctgagcagggttatgtt
gaaacgcttgatggccgccgtctgtacctgccggatatcaaatccagtaacgccatgcgt
cgtaaaggcgccgagcgtgctgcaatcaacgccccgatgcagggaacggcggcggacatt
atcaaacgcgccatgatcagcgtcgctgactggctgaaacaaccggatgctccgcgtgcc
cgcatcatcatgcaggtacacgatgaactggtgtttgaggtgcataaggatgatgtcacg
gcagcgagcgagaaaattcgcgatctgatggaagcgagtatgacgctggcagttccgcta
aaagtggatgtcggaacgggtgaaaactgggatcaggctcactaa
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