KEGG   Rahnella sikkimica: BV494_17460
Entry
BV494_17460       CDS       T05331                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
rox  Rahnella sikkimica
Pathway
rox03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BV494_17460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rox03400]
    BV494_17460
Enzymes [BR:rox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BV494_17460
DNA repair and recombination proteins [BR:rox03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BV494_17460
SSDB
Motif
Pfam: WHD_PriA PriA_3primeBD DEAD ResIII PriA_C Helicase_C Zn_ribbon_PriA AAA_30 Zn_ribbon_6 TrwB_AAD_bind AAA_19 WHD_PriA_bact
Other DBs
NCBI-ProteinID: AVF36608
UniProt: A0A2L1UUW0
LinkDB
Position
complement(3783697..3785892)
AA seq 731 aa
MPVAHVALPVPLARTFDYLLPPGLQVSQGCRVSVPFGKRDAIGIVTRVSDSSEFGLEKLK
PVREVLDASSLFTPDLWRILLWAADYYHFPIGEVLFHALPVLLRQGKPAELTPLWQWFAT
EQGRATPLESLKRAPKQQQAMAALIQKPLYRHQVADLELTDTALQALRVKGLTDLRSIAP
ATQDWRKDFSVVGERLRLNTEQATAVGAIRSEDQQFSAWLLAGVTGSGKTEVYLSVLENI
LAQGRQALVMVPEIGLTPQTIARFRERFSAPVDVLHSGLNDSERLSVWLRARNGEAGIVI
GTRSSLFTPFARLGVIIIDEEHDSSYKQQEGWRYHARDLAVYRAHAENIPIIMGSATPAL
ETLHNVELGKYRQLKLTKRAGNAKLARQNLLDLKGLQLKVGLSQPLIQRMQEHLKADNQV
MLFLNRRGYAPALLCHECGWIAECQRCDHYYTLHQNQRQLRCHHCDSQRAVPNQCPQCGS
TQLVSVGVGTEQLENELAPLFPNTPITRIDRDTTSRKGSLEQHLNEVHRGGARILIGTQM
LAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHHP
EHPLLQVLLHKGYDEFAKQTLAERKSVFLPPYTSHIMIRSEDHDNQQSALFLQQLRNLLE
SSPLKDDSLWILGPVPALAAKRNGRFRWQLLLQHPSRRVLQHLIKSSQPLIASLPQAKKV
KWTLDVDPIDS
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgcctgttgcccacgtcgcgttacctgttccactcgcccgtactttcgattacctcctg
ccgcctggattacaggtttctcaggggtgtcgggtcagtgtgcctttcggtaaacgcgac
gcgattggcatcgttacacgcgtcagtgattccagcgaatttggcctggaaaagctgaaa
cccgtgcgtgaagtcctcgacgcttcgagcctgttcacacccgatctttggcgcatcctg
ctctgggctgccgactattatcattttcccatcggcgaagtgttgtttcacgcgctgccg
gtgctgttacgtcaggggaaacccgctgaactgacgccgctgtggcaatggtttgccacc
gaacaggggcgcgccacgccgctcgagagcctcaaacgtgcgccgaaacagcaacaggcg
atggcggcgttgattcaaaaaccgctgtaccgccatcaggttgctgacctcgaactgacc
gataccgccttgcaggcgctgcgggtaaaagggctgaccgatttacgcagcatcgcgcct
gccacacaagactggcgcaaagacttctccgtcgtcggcgaacgcctgcgtcttaacacc
gaacaggccaccgccgtcggtgccatccgcagtgaagatcagcagttttccgcctggctg
ctggccggtgtcaccggctcgggtaaaaccgaagtgtatctgagtgtgctggaaaacatt
ctcgcacagggtcgccaggcgctggtgatggtgccggaaatcggcctgacgccgcagacc
atcgcgcgttttcgcgaacgtttcagcgcaccggtggatgttttgcattccgggcttaat
gacagcgagcgcctttccgtctggcttcgtgcgcgcaatggtgaagccggaattgtgatc
ggcacgcgctcgtcgctgttcacaccgtttgcccggctgggcgttatcattatcgatgaa
gaacacgacagctcttataagcagcaggaaggctggcggtatcacgcgcgggatctcgcg
gtatatcgcgcccacgcggaaaacatccccattattatgggctcggcaacgcctgcgctg
gaaacgctgcacaacgtggaactgggcaaatatcgtcagctgaaactgaccaaacgcgcc
ggtaacgccaaactcgcgcggcagaatttgctggatttaaaagggttgcagctgaaagtc
gggctttctcagccgctgatccagcgcatgcaggaacatctcaaagccgacaatcaggtc
atgctgttcctcaaccgccgcggctatgcgcctgccctgctctgccacgaatgcggatgg
attgctgaatgccagcgctgcgatcactattacacgctgcatcagaatcagcgccagtta
cgctgccaccattgcgacagccagcgtgccgtgccgaatcagtgtccgcagtgcggatcg
acgcagctggtgtccgtcggcgttggcaccgagcagttggaaaacgaactggcgccgctg
ttcccgaacacgcccatcacccgcattgaccgcgacaccaccagccgcaaaggctctctg
gaacagcatctgaatgaagtgcatcgcggcggcgcacgtattctaatcggcacgcaaatg
ctggccaaaggccaccatttcccggatgtcacgctggtctcgctgctggatgtcgacggc
gcgttgttctcggcagatttccgttcagcagaacgttttgcccagctctatacccaggtt
tcaggccgtgccggtcgtgccgggaaacagggggaagtggttttacaaacacatcaccct
gaacatccgctgttgcaggttctgttgcataaaggctacgacgaatttgcgaaacagacg
cttgccgagcgcaagagcgtctttctgccgccttacaccagccacattatgatccgctct
gaagaccatgataatcagcagtcggcgctgttcctgcaacaactgcgaaatctgctggaa
tccagcccgctgaaagatgattcattgtggattttagggccggtgcctgctctggcggcc
aagcgtaacgggcgtttccgctggcagctgttattgcagcatccttcacgccgcgttttg
cagcatctgatcaagagttctcagccgctgattgccagcctgccgcaggctaaaaaggtg
aaatggacgctggatgtggatccgatcgatagctaa

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