Rahnella sikkimica: BV494_17570
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Entry
BV494_17570 CDS
T05331
Name
(GenBank) TonB-dependent vitamin B12 receptor
KO
K16092
vitamin B12 transporter
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_17570
Transporters [BR:
rox02000
]
Other transporters
Pores ion channels [TC:
1
]
BV494_17570
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AVF36628
UniProt:
A0A2L1UUY1
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All DBs
Position
3814023..3815885
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AA seq
620 aa
AA seq
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MTIKKHVLLTALSVTAFSGWAQDSTSTNSSDNLVVTANRFPQPVSSVLAPTDVVTREDID
RWQSKSVADVLRRLPGVDIAQNGGMGQQTSLFVRGTSSSHTLVLIDGVRLNQAGISGSAD
ISQIPLSLVQRIEFIRGPRSAVYGSDAIGGVVNIITTRDKDGTTLGAGIGSNGYQNYNGS
TQQKLGENTTVTAAGDYTYTRGIDVVADGNTGGVPQPDRDGFMSKTLYLALQHEFNDDIS
GFARAYGYDNRTAYDAYYTPGSALIDTRQLYSRTYDTGLRYQNGIYATQLIGSYSHVKDY
NYDPKYGPYDSSASLDDSDQYNVQWGNTLQVWKGEVSAGLDWQKLTTEPGTSYLADGYDQ
HNTGVYLTTQQKISDFTLEGAVRSDDNSQFGQHTTWQSSAAWEFIDGYRLIASYGTAYKS
PNLSQLYSSYYGNPDLKPEESKQWEGGLEGLTGPLDWRLSVYRNDIDQMIDYDSSTSRYY
NIGKATIKGVEWTGSFDTGPLRHQITLEYLDPRNAETNEILVRRAKQQAKYQIDWNIADI
DWSINYQYLGQRYDTDYGSYPYQTVKLGGVSLWDLAASYPVTSHLTVRGRIANLLDKDYE
TVYGYETPGREYYLSGSYTF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgacaattaaaaagcatgtgctgctgacggcattatccgtcacggctttttcagggtgg
gcgcaagacagcacttccacaaacagcagtgataacctggttgtcacggctaatcgtttt
ccacagccggtttcttctgtattagccccgacggatgtcgtgacacgcgaggatatcgac
cgctggcagtcaaaatctgtcgctgacgtccttcgtcgtttaccgggcgtcgatattgcc
cagaatggcggaatggggcagcagacgtctttatttgttcgcggtaccagctccagccac
actttggtgttaatcgacggcgttcgactgaatcaggccgggatttccggttctgcggat
attagccagattcctctctcattagttcagcgtattgagtttattcgcgggccacgttca
gcagtttatggttctgacgcaatcggcggcgttgttaacattattacgacgcgcgataaa
gacggtacaacgctcggcgcgggtatcggctcaaacggttatcagaactacaacggttcc
acgcagcagaagctgggtgagaacaccacggtgacggcggcgggtgattacacctatacg
cgcggcattgacgttgtggctgatggcaatacgggcggcgttccgcagccagaccgcgac
gggttcatgagtaaaacgctctatctggcgctgcaacatgagtttaatgacgatatcagc
ggttttgcgcgggcttacggttatgacaaccgcactgcgtatgatgcctattacacacca
ggcagtgcgcttatcgatacccgccagctttacagccgtacatacgacaccggtctgcgt
tatcagaacggcatttatgccacgcagttaatcggcagctacagccacgtcaaagactat
aactacgatccgaaatacggcccgtacgattcctctgcttcgctcgatgactctgatcaa
tacaacgtgcaatggggcaacaccttgcaggtatggaaaggggaagtcagcgcagggctg
gactggcagaaactgaccactgagccgggcaccagttatctcgccgatggctatgaccag
cacaacaccggcgtttatctgacaacgcagcagaaaatcagtgatttcacgctggaaggc
gcggtgcgtagcgatgataactcgcagtttggtcagcacacgacctggcaaagcagcgcg
gcatgggaattcattgacggctatcgcctgattgcctcttacggcacagcgtacaaatca
ccgaatctgagccagctttacagcagctactatggcaacccagatctgaagccagaagaa
agtaagcaatgggaagggggactggaaggtctgacggggcctctggactggcgcttatca
gtctatcgtaacgacatagaccagatgatcgattacgacagttcgaccagccgttattac
aacatcgggaaagcgacaattaaaggcgtcgaatggacgggttcctttgatacgggcccg
ttgcgccaccagattactttggaatatctcgacccacgtaatgccgaaaccaacgaaatt
ctggttcgccgtgccaagcagcaggcgaaataccagattgattggaatatcgccgacatc
gactggtcgatcaattaccagtatctgggccaacgttacgatactgactacggttcgtac
ccttatcagacggttaagctcggcggtgtcagcctgtgggatctcgccgcgtcatatccg
gtcacctcacacctgacagttcgtggtagaattgccaacctcttagataaagattacgag
acggtttatggctacgaaacaccaggacgtgagtactatctctctggaagctataccttc
tga
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