Rahnella sikkimica: BV494_18235
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Entry
BV494_18235 CDS
T05331
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
rox
Rahnella sikkimica
Pathway
rox00071
Fatty acid degradation
rox00280
Valine, leucine and isoleucine degradation
rox00310
Lysine degradation
rox00362
Benzoate degradation
rox00380
Tryptophan metabolism
rox00410
beta-Alanine metabolism
rox00640
Propanoate metabolism
rox00650
Butanoate metabolism
rox00907
Pinene, camphor and geraniol degradation
rox00930
Caprolactam degradation
rox01100
Metabolic pathways
rox01110
Biosynthesis of secondary metabolites
rox01120
Microbial metabolism in diverse environments
rox01200
Carbon metabolism
rox01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
BV494_18235
00650 Butanoate metabolism
BV494_18235
09103 Lipid metabolism
00071 Fatty acid degradation
BV494_18235
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
BV494_18235
00310 Lysine degradation
BV494_18235
00380 Tryptophan metabolism
BV494_18235
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
BV494_18235
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
BV494_18235
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BV494_18235
00930 Caprolactam degradation
BV494_18235
Enzymes [BR:
rox01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
BV494_18235
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
BV494_18235
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
BV494_18235
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
BV494_18235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AVF36741
UniProt:
A0A2L1UV02
LinkDB
All DBs
Position
complement(3951217..3953409)
Genome browser
AA seq
730 aa
AA seq
DB search
MLYQGETLHLHWLDGGIAELVFDAPGSVNKLDTQTVASLGEAIAVLEKQSGLKGLLLSSA
KSAFIVGADITEFLSLFNAPAEKLHEWLSFANRIFNRLEDLPVPTLSAISGYALGGGCEC
VLATDFRISTADARIGLPETSLGIMPGFGGSVRLPRLIGTDSALEIIAAGKNISGKDALK
IGLVDAVVDAEKLRDAGISMLQQAIAGKLEWQSRREPKRQPLKLSQIEAAMSFSVAKSMV
MQNAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLAQSKEARALVSIFLNDQFVK
GKAKKLAQDSEKPAQAAVLGAGIMGGGIAYQSALKGVPVMMKDISEPSLTLGMNEAAKLL
NKQLERGKLDGMKMAKVLSTIHPTLDYSGIERAKVVVEAVVENPKVKAAVLVEAESLLSA
DTVLASNTSTIPIDQLASSLKRPENFCGMHFFNPVHRMPLVEIVRGEKTSDKTISRIVSY
ALAMGKTPIVVNDCPGFFVNRVLFPYLSGFSLLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMARSYRDAVDVLFDNRRFGQKNQLGFYRYSQDSKGKP
RKDVDDEAISLLAENLKPVHSDFSPQDIIARMMIPMINEVVRCLEEGIIASPAEADMALV
YGLGFPPFHGGPFRYLDTLGTAAYLKLTEQYAHLGPMYQAPEGLRAKAQANESYYPVAAG
LENLSTGNQA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacatctgcactggctcgatggcggtattgctgagctg
gtgtttgacgctccgggctcggtgaacaagctcgatacccaaacggtcgccagcctcggc
gaagccattgcggtactggaaaaacagtccgggctgaaaggcttgctgctcagttcagcg
aaatccgctttcattgtgggtgcggatatcaccgagtttttatctctgtttaacgcaccg
gcggaaaaactgcacgagtggctgagttttgccaaccgcattttcaaccggctggaagat
ttaccggtcccgacgctttctgccatcagcgggtatgcgctgggcggaggctgcgaatgc
gtactggccaccgatttccgtatcagcacggctgacgcgcgcatcggtttaccggaaacc
agcttaggcattatgccgggctttggcggctcggtgcggcttccgcgcctgattggtaca
gacagcgcgctggaaattatcgccgcaggcaaaaatatcagcggcaaagatgccctgaaa
atcgggctggttgatgcggtcgttgatgcagagaaactgcgcgatgccggtatcagcatg
ctgcaacaggccatcgccgggaaactggaatggcagagccgccgcgaaccgaaacgtcag
cctctgaaactcagccagattgaagcggcgatgagcttcagcgtggcgaaaagcatggtc
atgcagaatgccggaaaacattacccggcaccgatgacggcggtaaaaactatcgaagct
gcggcgcgccttggccgtgacgaagcacttaaactggaaaccgccagttttgttcctctc
gcgcaatcaaaagaagcgcgtgcgctggtcagcattttccttaacgaccagttcgtgaaa
ggtaaagccaaaaaactggcgcaagacagtgaaaaaccggcgcaggctgccgttctcggc
gcggggattatgggcggtggtatcgcttatcagtctgcgctgaaaggcgtgccggttatg
atgaaagacatcagcgaaccgtccctgacgctcggcatgaatgaagcggcaaaactgctg
aacaagcaactggaacgcggcaagctggacggtatgaagatggcaaaagtgctgtcgaca
atccatccgacgctggattacagcggcatcgaacgtgccaaagtggtggtcgaagcggtc
gtggaaaatccaaaagtgaaagccgccgtgctggttgaagcggaatccctgctcagcgcc
gacacggttctggcgtccaacacctcaaccattcctatcgaccagctggcctcctcgctg
aaacgcccagaaaacttctgcggcatgcacttctttaacccggttcaccggatgccgctg
gtggaaatcgttcgtggcgagaaaacttcggacaaaacaatttcgcgcatcgtctcttac
gcgctggcgatgggcaaaacgccgatcgtggtcaacgactgcccggggttctttgttaac
cgcgtgctgttcccgtatttatccggtttcagtctgctgctgcgtgacggcgcggacttc
cgccagatagacaaagtcatggaaaaacagtttggctggccgatgggcccggcctatttg
ctggatgtcgtgggcatcgataccgctcaccacgcgcaggctgtcatggccgccggattc
ccgcagcgcatggcccgcagttaccgcgacgccgtggatgtcttattcgacaaccgccgc
tttggtcagaaaaaccagctgggcttctaccgttacagccaggacagcaaaggcaagcca
cgtaaagacgtcgatgacgaagcgatcagtctgttagctgaaaaccttaaacctgtgcat
tccgatttctcaccgcaggacatcattgcccgtatgatgatcccgatgattaacgaagtg
gtgcgctgcctggaagaaggcattatcgccagccctgcagaagccgatatggcactggtt
tacggcctcggattccctccgttccacggtggcccgttccgttatctggatacgctcggc
actgccgcatacctgaaactgaccgaacaatacgcacacctcggcccgatgtatcaggcc
ccggaagggttacgcgccaaagcacaggcaaatgaaagttattatccggttgcggctggg
ctggaaaacctcagcaccggcaatcaggcataa
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