Rahnella sikkimica: BV494_18390
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Entry
BV494_18390 CDS
T05331
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rox
Rahnella sikkimica
Pathway
rox00730
Thiamine metabolism
rox01100
Metabolic pathways
rox01240
Biosynthesis of cofactors
Module
rox_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BV494_18390
Enzymes [BR:
rox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BV494_18390
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AVF36764
UniProt:
A0A2L1UV66
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Position
complement(3985492..3987456)
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AA seq
654 aa
AA seq
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MSSTQKPVTSEKKPANRREQRAQAQSFIDSLQGEAFPNSRRIYLQGDDADIRVPMREIQL
SPTLVGGGKDNPQFEENEAIPVYDTAGPYGDPSATLDVHTGLEKLRARWITGRADTEELP
QVSSGFTQQRLADEGLDHLRFEHLPRPRKALAGKNVTQLHYARRGMITPEMEFIAIRENM
GRERIRGEVLRQQHPGESFGAHLPANITAEFVRQEVAAGRAIIPANINHPESEPMIIGRN
FLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPI
GTVPIYQALEKVNGIAEDLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGI
VSRGGSIMAKWCLSHHRESFLYENFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFA
ELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAP
GYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHP
GAQIRDNAMSKARFEFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSM
KITQEVRDYAAALEAKAQPVELVEAGMAQMSAEFRSRGSELYHPASHSTPEISK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtacccagaaacccgttacatccgaaaaaaaacccgctaaccgccgtgagcaa
cgcgcacaagcacagtcgtttatcgacagcctgcagggcgaagcctttcccaattcccga
cgtatctatcttcaaggcgacgacgccgatattcgcgtccctatgcgggaaatccagctc
agcccgacgctggtcggcggcggaaaagacaacccgcagtttgaggaaaacgaagcaatt
ccggtttatgacaccgccgggccgtatggcgatccgtctgcgaccctcgacgtgcatacc
ggtctggaaaaattgcgtgcccgctggataaccggacgcgccgatacggaagaactcccg
caggtcagctccggttttactcagcagcgtctggccgacgaagggctggatcatttacgc
tttgaacatcttccgcgcccgcgaaaagcccttgccggtaaaaatgtcacgcaactgcat
tacgcgcgccggggcatgattacacctgagatggaatttatcgccattcgcgaaaatatg
gggcgcgagcggatccgcggagaagttctgcgccagcaacatcctggtgaaagctttggc
gcgcatctgcccgccaatatcaccgcagagttcgttcgtcaggaagttgccgccggacgc
gcgattatccctgcgaacatcaaccatccggaatccgagccgatgatcattggccgtaat
tttctggtgaaggtcaatgccaatatcggcaactcagccgtgacgtcctccatcgaagaa
gaagttgaaaaactggtgtggtcgacgcgctggggcgcggataccgtgatggatctctcc
accggccgctatatccacgaaacccgcgaatggatcctgcgtaacagcccggttccgatt
ggcaccgttccgatttatcaggcgctggaaaaagtgaacggcattgccgaagacctgaac
tgggaaatgtttcgcgacaccctgctggaacaggccgaacaaggcgtggattacttcacc
attcacgcgggcgtgttgctgcgttacgtaccgatgaccgccaaacgcctgaccggcatt
gtttcacgcggtggctcgatcatggcgaaatggtgcctgtcgcatcatcgcgaaagtttc
ctgtacgagaatttccgtgagatttgcgaaatctgcgccgcttacgatgtctcgctttct
cttggcgacggcctgcgaccaggttcgattcaggacgccaacgatgaagcgcagttcgca
gaattgcacacgctgggtgaactgacaaaaattgcctgggagtatgacgtgcaggtgatg
atcgaagggccggggcatgtgccgatgcaaatgatccgccgcaatatgacggaagaactc
gagcattgccacgaagcgccgttctatacgctcgggccactgacgacagatatagcgccc
ggttatgaccacttcacatccggaatcggtgccgcaatgattggctggtttggttgcgcg
atgctgtgctacgtcacgccaaaagagcatctcggcctgccgaacaaagaagacgttaaa
cagggtttgattacctacaagattgcggcgcacgcggcagatttagcgaaaggccatccg
ggcgcgcaaattcgtgataacgccatgtctaaagcgcggttcgaatttcgctgggaagac
cagtttaatctggccctcgatccggctacagcccgcgcttatcacgacgaaaccctcccg
caggaatccggaaaagtcgcgcacttctgttcaatgtgcgggccgaaattctgttccatg
aaaatcactcaggaagttcgcgattacgccgccgcgctggaagccaaagcccagcccgtc
gaactcgtagaagccggcatggcacaaatgtctgcggaattccgttcgcgcggcagcgag
ctttatcaccctgccagccattccactccggagatcagtaaatga
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