Rahnella sikkimica: BV494_19065 Help Entry BV494_19065       CDS       T05331                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism rox  Rahnella sikkimica Pathway rox02020   Two-component system rox02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:rox00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     BV494_19065  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     BV494_19065  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rox03021]     BV494_19065 Transcription machinery [BR:rox03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      BV494_19065 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  AVF36889 UniProt:  A0A2L1UVA7 LinkDB All DBs Position complement(4137187..4138620) Genome browser AA seq 477 aa AA seqDB search MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAVE TPDSEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGNDYSDDELPIYQGETTQTL QDYLMWQVELTPFTDTDAAIATSIVDAVDDTGYLTISLDDILESIGDDNVSMDEVEAVLK RVQRFDPVGVAARDLRDCLLIQLSQYATDTPFITEARLIISEHLDLLANHDFRALMRSTR LKEDTLKGAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKVSGVWTVELNSDSIPRLKIN QQYAAMGNSARSDSDGQFIRSNLQEAKWLIKSLESRNDTLLKVTRCIVEQQQAFFESGDE FMKPMVLADIASAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVSTDSGGEASSTAI RALVKKLIAAENPVKPLSDSKLATLLSDQGIMVARRTVAKYRESLSIPPSNQRKQLV NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt atgaagcaaggtttgcaactcagactcagccaacaactggcaatgactcctcagttacaa caggccatccgcctgttgcaactgtccacgcttgagctccaacaggagatccaactcgcg ctggagagcaaccctctgctggaacaaactgacctgcacgaagaaattgatgcggtagaa accccggacagcgaagggttagacacccgcgaagccctcgagcaaaaagacatgcccgaa gagttgccgctggacgccacctgggacgagatttataccgcaggcacgccttccggtacc ggcaacgattacagcgacgatgagctgccgatttatcagggcgaaaccacccagacgctt caggattacctgatgtggcaggttgaactgacgccgtttactgatactgatgccgcgatc gcaacgtctattgtcgatgccgtagatgataccggctacctgaccatttcccttgacgac atcctcgaaagcatcggtgacgacaacgtcagcatggacgaagtggaagccgttctcaaa cgcgttcagcgttttgacccggtcggtgtggcggcgcgcgacctgcgtgactgcctgctg atccagctttcccagtacgccacagacacccctttcatcaccgaagctcggctgattatc agcgaacatctggatttgctggcgaaccatgatttccgcgcacttatgcgttcaacccgg ctaaaagaagatacactgaaaggagcgatgctcctgattcagtctcttgatccgcgtccg ggccagtcaatcaacaccggtgaatccgaatacgtgatccccgatgtgctggtgcgtaaa gtgtctggtgtctggaccgttgaattgaactctgacagcattccgcgtttgaagatcaac cagcaatacgccgcgatgggcaattccgcacgcagcgacagcgacggacaatttatccgc agcaatttgcaggaagccaaatggctgatcaaaagcctggaaagccgaaacgatacgctg ctgaaagtgacgcgctgcatcgttgaacaacagcaggcgttctttgagtcaggtgacgaa tttatgaaacccatggtgttggccgatatcgccagcgccgtggaaatgcatgaatcgacg atttcacgcgtaacgacgcagaagttcctgcacagcccgcgtggcattttcgagctgaag tattttttctccagccatgtcagtacagacagcggcggcgaggcatcgtcaaccgcgatc cgggcgctggtgaagaaattaatcgcagcggagaatcctgtaaaaccgctcagtgacagt aagttagccaccctgctttccgatcaggggatcatggtggcgcgcaggactgtcgccaaa taccgagagtctttgtccatcccgccctcaaaccaacgtaaacagttagtttga

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