Rahnella sikkimica: BV494_21025
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Entry
BV494_21025 CDS
T05331
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rox
Rahnella sikkimica
Pathway
rox00300
Lysine biosynthesis
rox00470
D-Amino acid metabolism
rox01100
Metabolic pathways
rox01110
Biosynthesis of secondary metabolites
rox01120
Microbial metabolism in diverse environments
rox01230
Biosynthesis of amino acids
Module
rox_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV494_21025
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BV494_21025
Enzymes [BR:
rox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BV494_21025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AVF37228
UniProt:
A0A2L1UWL5
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All DBs
Position
4548858..4550117
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AA seq
419 aa
AA seq
DB search
MPRALNDTSTALNAANLLALPQQFGCPVWAYDAEIIKQRIAQLRDFDVIRFAQKACSNIH
ILRLMRGQGVKVDSVSLGEIERALVAGFIPGRENSEIVFTADVLDQPTLERVTALDIPVN
AGSIDMLGQIGQHKAGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWHADLPQALAEIAR
YDLKLVGIHMHIGSGVDYGHLEQVCDAMVRQVIETGHDIEAISAGGGLSIPYHFDEESID
TGHYFGLWNRAREQIAAHLGHEVKLEIEPGRFLVAESGVLVAQIRAAKNMGSRHFVLCDA
GFNDLMRPAMYGSYHHISLLPADGRDLSGQPLTESVIAGPLCESGDVFTQQAGGGVETFP
LPPVQIGDYLVFHDTGAYGASMSSNYNTRPLLPEVLFENGVPRLIRRRQTVDELIALEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgccctgaacgatacgtccactgcacttaacgccgcgaatttgctggcgctc
ccgcaacaatttggttgcccggtctgggcgtacgacgctgaaatcattaagcagcgtatc
gcgcagttgcgtgattttgacgtgatccgctttgcgcaaaaagcctgttcgaatattcac
attctgcgcctgatgcgcgggcagggcgtgaaagtggactcggtatcgctgggcgaaatc
gagcgtgcgctggtggccggttttattcccggtcgtgaaaacagtgaaatcgtgtttacc
gccgacgtgttggatcagcctacgcttgagcgcgtgacggcgctggatattccggtaaac
gccggttccattgatatgctcggccagattggtcagcacaaagccgggcatccggtgtgg
ctgcgtgtaaatccgggcttcggtcacggtcatagccagaaaaccaataccggcggtgaa
aacagcaaacacgggatctggcatgccgatttgccgcaggcgctggctgaaattgcccgt
tacgacctgaaactggtgggcattcatatgcacatcggttccggcgtggattacggccat
cttgagcaggtttgtgatgccatggttcgccaggtcattgaaaccggacacgatattgaa
gcgatttcagcgggcggcgggttgtcgattccgtatcattttgacgaagaatctatcgat
accggccactattttggtttgtggaaccgtgcgcgtgagcagattgcggcgcatctcggg
catgaggtgaaactggaaatcgaaccggggcgtttcctggtcgcggaatccggtgtgctg
gtggcgcaaatccgtgcggcgaaaaacatgggcagccgccatttcgtgttgtgcgacgcc
gggtttaacgatctgatgcgtccggcgatgtacggcagttatcaccatatttcactgtta
ccggcagatggccgtgacctcagcggtcagccgctgacggaatccgtgattgccgggcct
ttgtgtgaatccggcgacgtatttacccagcaggcgggcggcggcgttgaaaccttcccg
ctgccaccggtgcagatcggcgattatctggtgttccacgataccggcgcctacggcgca
tcgatgtcttccaactacaacacccgtccgctgctgcctgaagtgctgttcgaaaatggc
gttccgcggttgattcgccgccgtcagacggtagatgaactgattgccctggagctataa
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