Rahnella sikkimica: BV494_21195
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Entry
BV494_21195 CDS
T05331
Name
(GenBank) transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
rox
Rahnella sikkimica
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rox03000
]
BV494_21195
Transcription factors [BR:
rox03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BV494_21195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AVF37257
UniProt:
A0A2L1UWH1
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Position
4584970..4585890
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AA seq
306 aa
AA seq
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MSKRLPPLNSLRVFDAAARHLSFTKAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSL
LLTEEGQSYYLDIKEIFSALNEATRKLQARSAKGALTVSLPPSFAIQWLVPRLSGFNSAY
PGIDVRIQAVDREEDKLSDDVDVAIFHGRGNWPGLRAERLYAEYLLPVCSPSLLMGDNPL
KEPADLSHHTLLHDASRRDWLAYTKQLGLQQVNVQQGPIFSHSAMVVQAAVHGQGIALVN
NVMAQTEIEAGRLVCPFSEVLISKNAFYLVCHDSQAELGKIAAFRQWILARAASEQEKLR
FRFDQA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtttaccgccactgaattctctgcgggtgtttgatgccgcagcgcgccac
cttagttttactaaagcggctgaggaattgttcgtcacacaggccgctgttagccaccag
attaagtcacttgaggactttttagggctaaaactgtttcgcaggcgtaatcggtcattg
ttactgaccgaagaagggcagagttattatctggatatcaaagagatattctcggccctc
aacgaggcaacgcgtaaacttcaggcgcgtagtgcgaaaggcgcgctgaccgtcagtttg
ccgccaagctttgcgattcaatggctggtgccgagattgtctggctttaactcagcttat
ccgggcatcgatgtgcgtatccaggccgttgaccgcgaagaggacaaattgtccgacgac
gtggacgtggcgattttccacgggcgcggcaactggccgggtctgcgggcggaacgttta
tatgccgaatatttactcccggtttgttctccgtctttgctgatgggcgataatccgctg
aaagaaccggcagatttgagtcatcacacgttattgcacgatgcctcgcgccgcgactgg
ctggcctacaccaaacagctgggattgcagcaggtgaatgtgcaacaggggccgattttc
agccacagtgcgatggtcgttcaggcggcggttcacgggcaggggattgcgctggtgaat
aatgtaatggcgcagacggaaatcgaggccggacgtctggtgtgtccgttcagtgaagtt
ttaatcagtaaaaatgctttttatctggtttgtcatgacagtcaggcagaactgggtaaa
atagccgcctttcgtcagtggatccttgcccgcgcagccagcgagcaggaaaaactgcgt
tttcgtttcgatcaggcgtga
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