Rahnella sikkimica: BV494_21850
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Entry
BV494_21850 CDS
T05331
Name
(GenBank) virulence factor SrfB
Organism
rox
Rahnella sikkimica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SrfB
Motif
Other DBs
NCBI-ProteinID:
AVF37577
UniProt:
A0A2L1UXD5
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Position
unnamed1:complement(87384..90371)
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AA seq
995 aa
AA seq
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MLATITDFKQTIFKQAVTLIQDSGIQFLDFALKPVWDDALPAKFVRKSANGPLLRLDFNP
QNGRHFLPGVDGGAPEVVRPEFSFPLEQSLKLLDQIWLPLPFLRFNPPRTFMAGPDNWAR
VQIRALDTPEADGSTHRVVVAFDTRVTEGDDEQALLAPTPDDVKNGINFALAWHNEELPE
FLDHTWVDGWLREVFTEQAALREDREARNIKVALREFEYQAHYLNLLEMLGSQLSIPELK
INGATLQEPAINVDLILDVGNSHTCGILVEDHVGETDGLKQTSELQLRDLSQPHFLYNEL
FESRVEFALARFGKPNFSVESGRDDAFTWPSILRAGREASRLALLREGTEGSTGISSPRR
YLWDEDSYTPGWRFSQGGHGAVQEPVAAAMPLTFLINDEGQPLSDLPPEDRLPVFSAHYS
RSSVMTLMLSELLAQAMMQINSPAQRIRMLRSSAPRQIRNIILTLPSAMPKPEREIFRRR
MQEAIGLVWKSMGWHPADDGFKNQTDKAKSRLPVPDVQMEWDEATCGQMVYLYNETQVNF
GGHTGEFFASMARPDRELADDEPVGKTLRIASIDIGGGTTDLAITQYWLDDGMGNNVKIT
PRLLFREGFKVAGDDILLDVIQLYILPALHAALKKAGLANPDSLMTRLFGSEGRMDGHAT
LRQQSTLQIFIPLAHAVLEVYERFDPLDTHAEIDAPFGELLGQHPTQKVLEYLHSEIQRV
LPAGSAVFDILQAPLVLKLSKLHNEFLSNRMSITQNLRSLCEVVSLHDCDVLLLTGRPSR
FPGIQALFRHLQPLPINRMLSLDGYHTSGWYPFNKQGRIDNPKSTAAVGAMLCLLALDLR
LPGFYFKAGDFQPYSTVRYLGMMDGNQVLTDDNVCYSDIDLDAHDYKLDSAASFRIRGAI
CLGFRQLENDRWPASPLYTLSIAEPELARKVAGDSVLRVKLAVKKGEDHPTPEFFDIASA
VLDNGTKVPSHHLRLRLNTLGESHYWIDSGSVFVS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaaccattacagattttaaacagaccatttttaagcaggccgtgaccctgatc
caggacagcggcattcagtttctcgacttcgcgctcaagcccgtatgggacgacgcgctg
cctgccaaattcgtgcgcaaaagcgccaacggcccgctgctgcgtctggattttaacccg
caaaatggccgtcatttcttaccgggcgtggatggcggcgcgccggaagtggtgcgtcct
gaattcagtttcccgctggaacagtcgctgaaattgctcgatcagatctggctgccgctg
ccgttcctgcgttttaatcctccgcgcacctttatggctggcccggataactgggcgcgt
gtgcaaatccgtgcgctcgatacgccggaagcggacggcagcacgcaccgcgtggtggtg
gcgtttgatacccgcgtgaccgaaggcgatgacgaacaggcgctgcttgctccgacgccg
gacgacgtgaaaaacggcattaactttgcgctggcgtggcacaacgaagagctgcctgag
ttccttgaccatacctgggtggacggctggctgcgtgaggtctttaccgagcaggctgca
ctgcgtgaagaccgcgaggcgcgcaatatcaaagtcgcgctgcgcgagtttgaatatcag
gcgcactatctgaacctgctggaaatgctcggcagtcagctgagtattccggagctgaag
atcaacggcgcgacgcttcaggaaccggcgatcaacgtggatcttatcctcgacgtcggt
aactcgcacacctgcggcattctggtggaagaccatgtcggcgaaaccgacggcctgaaa
cagaccagcgaactgcaactgcgtgacctctcacagccacatttcctctacaacgagctg
ttcgagagccgtgtggaatttgctctggcgcgctttggtaaaccgaacttttccgtcgaa
agcggccgcgatgacgcgtttacctggccgtcgattctgcgtgccggtcgtgaagcgagc
cgtctggcgctgctgcgcgaaggcaccgaaggatcgaccgggatttccagtccgcgccgt
tatttgtgggatgaagacagttatacgccgggctggcgtttcagccagggcggccacggt
gcggtgcaggaaccggtggcggcggcgatgccgctgacgttcctgatcaatgacgaaggt
cagccgctgtctgacctgccgccggaagaccgcctgccggtgttttctgctcattacagc
cgcagctcggtgatgacgctgatgctgtccgaactgctggcgcaggcgatgatgcaaatc
aacagtccggcgcagcgcatccgtatgttgcgctcgtccgcgccccgccagatccgcaat
attattctgacgctgccgtcggcgatgccaaaacctgagcgtgaaattttccgccgcaga
atgcaggaagcgattggtctggtgtggaaatcgatgggctggcatcccgcggatgacggt
ttcaaaaatcagaccgataaagccaaaagccggttgccggtgcccgatgtgcagatggaa
tgggacgaagcgacctgcggccagatggtgtatctgtacaacgaaacgcaggtgaatttc
ggcggtcataccggtgaattctttgccagcatggcgcgccctgacagggaactggccgac
gatgaaccggtgggcaaaaccctgcgcatcgcgtcgatcgatatcggcggcggcaccacc
gatctggcgattacccaatactggctcgacgacggcatggggaataacgttaaaatcacc
ccgcggctgctgttccgtgaagggtttaaagtcgcgggcgacgatattctgctcgacgtg
atccagctttatattttgcccgcgctgcacgccgcgctgaagaaagccgggctggcgaat
ccggacagcctgatgacgcgcctgtttggcagcgaaggccgcatggacggccacgcgacg
ctgcgtcagcaaagtacgctgcaaattttcatcccgctggctcacgccgtgctggaagtt
tacgaacgttttgatccgctggacacacacgcggaaattgatgcgccgtttggcgaactg
ctggggcaacatccgacacagaaagtgctggagtatctgcacagcgaaattcagcgcgtg
ctccctgccggttccgccgttttcgatattttgcaggctccgctggtgctcaaactcagc
aaactgcacaacgaatttttatccaaccgcatgagcatcacgcagaatctgcgttcgctc
tgtgaagtggtgtcgctgcacgattgcgatgtgctgctgctgaccggccgcccttcgcgt
ttccccggtattcaggcgttgttccgtcatcttcagccgttgccgattaaccgcatgttg
tcgctggacggttatcacaccagcggctggtatccgtttaataaacaggggcgtattgat
aacccgaaatccacggcggctgtaggcgcaatgctgtgcctgctggcgctggatttacgg
ctgccgggcttctatttcaaggccggtgatttccagccgtattccactgtgcgctatctc
ggcatgatggacggcaatcaggtactgaccgacgacaacgtctgttacagcgatatcgac
ctggatgcgcatgattacaagctcgacagcgccgccagtttccgtatccgtggcgcgatt
tgtctcggtttccgtcagttggaaaatgaccgctggcccgcgtcgccgctgtataccctg
tcgattgcggagccggaactggcgcgtaaagtggcgggcgacagtgtgctgcgtgtgaag
ctggcggttaaaaaaggtgaagatcacccgacaccggaatttttcgacatcgccagcgcg
gtgctggataacggcaccaaagtgccgtcccatcacctgcggctcaggctgaacacactg
ggcgaaagccattactggatcgacagtgggagcgtattcgtctcatga
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