Rahnella sikkimica: BV494_23350
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Entry
BV494_23350 CDS
T05331
Name
(GenBank) exodeoxyribonuclease X
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
rox
Rahnella sikkimica
Pathway
rox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BV494_23350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rox03400
]
BV494_23350
DNA repair and recombination proteins [BR:
rox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BV494_23350
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
QSregVF_b
Motif
Other DBs
NCBI-ProteinID:
AVF37825
UniProt:
A0A2L1UY20
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All DBs
Position
unnamed1:421278..421940
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AA seq
220 aa
AA seq
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MLRVIDTETCGLQGGVVEVASVDIEDGRIVNPMSDLVRPDRPISHQAMAIHKITEAMVAD
KPWIEDVIPRYHGSPYYVAHNASFDQRMLPEMPGQWICTVKLARRLWPGIKYSNMALYKS
LKLDVKTPAELHHHRALFDCYITAALLIRIMDESDWTPEDMVTITGRPALISTMMFGKYR
GKKIAEIAEDDPAYLRWMLKNIKELTPDLRMTLKHYLDAQ
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtgtaattgatacggaaacctgcggattgcagggtggcgtggtggaagtggcg
tctgtcgatattgaggacggaaggatcgtcaatccgatgagcgatctggtgcgacccgac
cgcccgataagccatcaggcgatggcgatccataaaatcaccgaggccatggtggccgat
aaaccgtggattgaagatgtcattccccgctaccacggcagcccttattacgtcgcccat
aacgccagttttgaccagcgtatgctgcctgaaatgcccggccagtggatttgcaccgtc
aaactggcgcgtcgtttgtggcctggcatcaagtacagcaatatggcgttgtacaaatcc
ctgaagctcgacgtgaaaaccccggcggaactgcatcatcaccgtgcgctttttgactgc
tatatcaccgccgcgttacttatacgcatcatggatgaatcggactggacaccggaagat
atggtcacgatcaccggccgacctgcgctgatcagcaccatgatgttcggcaaatatcgc
ggcaaaaagattgcagaaattgccgaagatgacccggcctatttgcgctggatgctcaaa
aacatcaaagaattaacgcccgatctgcggatgacgcttaagcattatctggatgcgcaa
tag
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