Rhizobium oryzihabitans: G3A56_00510
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Entry
G3A56_00510 CDS
T06770
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3A56_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
roy03021
]
G3A56_00510
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_00510
Enzymes [BR:
roy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3A56_00510
Transcription machinery [BR:
roy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3A56_00510
DNA repair and recombination proteins [BR:
roy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3A56_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QIB36672
UniProt:
A0A7L5BCW3
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All DBs
Position
M15-11:81094..82104
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AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFTSSSRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGAVTAGDIQTVG
DIEILNPDHVICTLDDGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLIMTIETNGSVSGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaacttatcaagccgaacaaggtcgagttcacctcgtcc
agccgcaccaaggcaacgctggttgccgagccgctggagcgtggtttcggtcttaccctc
ggcaacgcgctgcgtcgcgttctgttgtcttctctgcgtggcgccgctgtgacggccgtg
cagatcgacggtgttctgcacgaattctcctccattcccggcgttcgggaagatgtgacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggtgacgattccaagcgc
atggtcgtgcgcaagcagggtccgggtgccgtaaccgctggtgacatccagacggttggc
gacatcgagatcctgaaccccgaccacgtgatctgcacgctggacgatggcgctgaaatc
cgcatggaattcaccgtcaacaacggcaagggttacgtaccggctgagcgcaaccgcgcg
gaagatgccccgatcggcctcattccggtggacagcctctattctccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgatcatg
acgatcgagaccaacggttctgtttccggcgaagacgccgttgcctttgccgctcgcatt
cttcaggaccagctgggcgtcttcgtcaacttcgacgagccgcagaaggaagcagaagaa
gaatcggtcaccgaactcgcgttcaacccggcgcttctcaagaaggtcgacgagctggag
ctgtcggttcgttcggcaaactgcctgaagaacgacaacatcgtttacatcggcgacctg
atccagaagaccgaagccgaaatgcttcgcacgccgaacttcggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggtctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgttacgaagaccagtactaa
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