KEGG   Rhizobium oryzihabitans: G3A56_03920
Entry
G3A56_03920       CDS       T06770                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
roy  Rhizobium oryzihabitans
Pathway
roy00010  Glycolysis / Gluconeogenesis
roy00020  Citrate cycle (TCA cycle)
roy00260  Glycine, serine and threonine metabolism
roy00280  Valine, leucine and isoleucine degradation
roy00310  Lysine degradation
roy00380  Tryptophan metabolism
roy00620  Pyruvate metabolism
roy00630  Glyoxylate and dicarboxylate metabolism
roy00640  Propanoate metabolism
roy00670  One carbon pool by folate
roy00785  Lipoic acid metabolism
roy01100  Metabolic pathways
roy01110  Biosynthesis of secondary metabolites
roy01120  Microbial metabolism in diverse environments
roy01200  Carbon metabolism
roy01210  2-Oxocarboxylic acid metabolism
roy01240  Biosynthesis of cofactors
Module
roy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
roy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
roy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:roy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    G3A56_03920 (lpdA)
   00020 Citrate cycle (TCA cycle)
    G3A56_03920 (lpdA)
   00620 Pyruvate metabolism
    G3A56_03920 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    G3A56_03920 (lpdA)
   00640 Propanoate metabolism
    G3A56_03920 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    G3A56_03920 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    G3A56_03920 (lpdA)
   00310 Lysine degradation
    G3A56_03920 (lpdA)
   00380 Tryptophan metabolism
    G3A56_03920 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    G3A56_03920 (lpdA)
   00670 One carbon pool by folate
    G3A56_03920 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roy04147]
    G3A56_03920 (lpdA)
Enzymes [BR:roy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     G3A56_03920 (lpdA)
Exosome [BR:roy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   G3A56_03920 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like FAD_binding_3 NAD_binding_8 2-Hacid_dh_C DAO GIDA AlaDh_PNT_C Lys_Orn_oxgnase Thi4 Amino_oxidase 3HCDH_N Trp_halogenase
Other DBs
NCBI-ProteinID: QIB37244
UniProt: A0A7L5BEC5
LinkDB
Position
M15-11:complement(697291..698736)
AA seq 481 aa
MAQSYDVIIIGSGPGGYIAAIRAAQLGMKVAVVEREHLAGICSNWGCIPTKALLRTADVM
HTATHAKDYGLTLEGSIKPDVKAIVARSRGIAARMNNGVGFLFKKNKVDIIWGEAKITKP
GEIVVGKSTKPVVQPQGPVPKNTLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEELPKSLLVMGSGAIGIEFASFYRTMGVDVTVVEIMSQVMPVEDAEISTFAKKQLE
KQGMKIHLETKVSKVEKGANSITATLEKKDGSSEKITADRMISAVGVVANIEGIGLEAAG
VKTDRGFIVIDGYGKTNVPGIYAIGDVAGPPLLAHKAEHEAVICVEKIAGLPNVHPMDKL
KIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFAANGKAVALGEDQGMVKTIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTISESMKESVLDAYGRVLN
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggctcaatcttatgacgtcatcatcatcggttcgggaccgggcggttatattgccgcg
atccgtgcagcccagctcggcatgaaggttgccgtggtcgagcgcgaacaccttgccggc
atctgctccaactggggctgcattcccaccaaggcgctgctgcgcaccgccgatgtcatg
cacaccgccacccacgccaaggattacggcctgacgctggaaggctcgatcaagcctgat
gtgaaggcaatcgtggcgcgctcgcgtggcatcgccgcgcgcatgaacaacggcgtcggt
ttcctgttcaagaagaacaaggtcgatatcatctggggtgaagcaaaaatcaccaagccg
ggcgaaatcgtcgtcggcaagtccaccaagccggtggttcagccgcagggtcccgtgccg
aagaacacgctgggcgagggcacttacactgccaagcacatcatcgtcgcgacaggcgcc
cgtccgcgcgcgcttcccggcatcgagccggatggcaagttgatctggacctatttcgag
gcgatgaagccggaagaactgccaaagtcgctgctcgtcatgggctcgggcgcgatcggc
atcgagttcgccagcttctaccgcaccatgggcgtagacgttaccgtcgtcgagatcatg
agccaggtcatgccggtcgaggatgcggaaatttccaccttcgccaagaagcagctcgaa
aagcagggcatgaaaatccaccttgaaaccaaggtttccaaggtggagaagggtgcgaac
tccatcaccgcgacgctcgagaagaaggacggttcttccgagaagatcaccgctgaccgc
atgatttcggccgtcggcgtcgtcgccaatatcgaaggtatcggcctcgaggcagcgggc
gtgaagacggatcgcggtttcatcgtcatcgacggttacggcaagaccaacgtacctggt
atctatgccatcggcgacgttgccggcccgccgctgcttgcccacaaggccgaacatgag
gccgtcatctgcgtcgaaaagatcgccggtctgccgaatgtccaccccatggacaagctc
aagattcccggctgcacctattgcaacccgcaggtcgcctcggttggtctcaccgaagcc
aaggcgaaggaacagggccgcgacatccgcgtcggccgcttctcctttgcagcaaacggc
aaggccgtggcgctcggcgaagatcagggcatggtcaagaccatcttcgacaagaagacg
ggtgagttgctcggcgcgcacatggttggtgcggaagtcaccgaactcattcagggcttc
gttgttgcgatgaacctcgagaccactgaagaagacctgatgcacacgatcttcccgcat
ccgacgatttcggagtcgatgaaggaaagcgtgctcgacgcctatgggcgtgtgctgaac
gcataa

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