Rhizobium oryzihabitans: G3A56_03920
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Entry
G3A56_03920 CDS
T06770
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00010
Glycolysis / Gluconeogenesis
roy00020
Citrate cycle (TCA cycle)
roy00260
Glycine, serine and threonine metabolism
roy00280
Valine, leucine and isoleucine degradation
roy00310
Lysine degradation
roy00380
Tryptophan metabolism
roy00620
Pyruvate metabolism
roy00630
Glyoxylate and dicarboxylate metabolism
roy00640
Propanoate metabolism
roy00670
One carbon pool by folate
roy00785
Lipoic acid metabolism
roy01100
Metabolic pathways
roy01110
Biosynthesis of secondary metabolites
roy01120
Microbial metabolism in diverse environments
roy01200
Carbon metabolism
roy01210
2-Oxocarboxylic acid metabolism
roy01240
Biosynthesis of cofactors
Module
roy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
roy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
G3A56_03920 (lpdA)
00020 Citrate cycle (TCA cycle)
G3A56_03920 (lpdA)
00620 Pyruvate metabolism
G3A56_03920 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
G3A56_03920 (lpdA)
00640 Propanoate metabolism
G3A56_03920 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G3A56_03920 (lpdA)
00280 Valine, leucine and isoleucine degradation
G3A56_03920 (lpdA)
00310 Lysine degradation
G3A56_03920 (lpdA)
00380 Tryptophan metabolism
G3A56_03920 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G3A56_03920 (lpdA)
00670 One carbon pool by folate
G3A56_03920 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
roy04147
]
G3A56_03920 (lpdA)
Enzymes [BR:
roy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
G3A56_03920 (lpdA)
Exosome [BR:
roy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
G3A56_03920 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
NAD_binding_8
2-Hacid_dh_C
DAO
GIDA
AlaDh_PNT_C
Lys_Orn_oxgnase
Thi4
Amino_oxidase
3HCDH_N
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
QIB37244
UniProt:
A0A7L5BEC5
LinkDB
All DBs
Position
M15-11:complement(697291..698736)
Genome browser
AA seq
481 aa
AA seq
DB search
MAQSYDVIIIGSGPGGYIAAIRAAQLGMKVAVVEREHLAGICSNWGCIPTKALLRTADVM
HTATHAKDYGLTLEGSIKPDVKAIVARSRGIAARMNNGVGFLFKKNKVDIIWGEAKITKP
GEIVVGKSTKPVVQPQGPVPKNTLGEGTYTAKHIIVATGARPRALPGIEPDGKLIWTYFE
AMKPEELPKSLLVMGSGAIGIEFASFYRTMGVDVTVVEIMSQVMPVEDAEISTFAKKQLE
KQGMKIHLETKVSKVEKGANSITATLEKKDGSSEKITADRMISAVGVVANIEGIGLEAAG
VKTDRGFIVIDGYGKTNVPGIYAIGDVAGPPLLAHKAEHEAVICVEKIAGLPNVHPMDKL
KIPGCTYCNPQVASVGLTEAKAKEQGRDIRVGRFSFAANGKAVALGEDQGMVKTIFDKKT
GELLGAHMVGAEVTELIQGFVVAMNLETTEEDLMHTIFPHPTISESMKESVLDAYGRVLN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcttatgacgtcatcatcatcggttcgggaccgggcggttatattgccgcg
atccgtgcagcccagctcggcatgaaggttgccgtggtcgagcgcgaacaccttgccggc
atctgctccaactggggctgcattcccaccaaggcgctgctgcgcaccgccgatgtcatg
cacaccgccacccacgccaaggattacggcctgacgctggaaggctcgatcaagcctgat
gtgaaggcaatcgtggcgcgctcgcgtggcatcgccgcgcgcatgaacaacggcgtcggt
ttcctgttcaagaagaacaaggtcgatatcatctggggtgaagcaaaaatcaccaagccg
ggcgaaatcgtcgtcggcaagtccaccaagccggtggttcagccgcagggtcccgtgccg
aagaacacgctgggcgagggcacttacactgccaagcacatcatcgtcgcgacaggcgcc
cgtccgcgcgcgcttcccggcatcgagccggatggcaagttgatctggacctatttcgag
gcgatgaagccggaagaactgccaaagtcgctgctcgtcatgggctcgggcgcgatcggc
atcgagttcgccagcttctaccgcaccatgggcgtagacgttaccgtcgtcgagatcatg
agccaggtcatgccggtcgaggatgcggaaatttccaccttcgccaagaagcagctcgaa
aagcagggcatgaaaatccaccttgaaaccaaggtttccaaggtggagaagggtgcgaac
tccatcaccgcgacgctcgagaagaaggacggttcttccgagaagatcaccgctgaccgc
atgatttcggccgtcggcgtcgtcgccaatatcgaaggtatcggcctcgaggcagcgggc
gtgaagacggatcgcggtttcatcgtcatcgacggttacggcaagaccaacgtacctggt
atctatgccatcggcgacgttgccggcccgccgctgcttgcccacaaggccgaacatgag
gccgtcatctgcgtcgaaaagatcgccggtctgccgaatgtccaccccatggacaagctc
aagattcccggctgcacctattgcaacccgcaggtcgcctcggttggtctcaccgaagcc
aaggcgaaggaacagggccgcgacatccgcgtcggccgcttctcctttgcagcaaacggc
aaggccgtggcgctcggcgaagatcagggcatggtcaagaccatcttcgacaagaagacg
ggtgagttgctcggcgcgcacatggttggtgcggaagtcaccgaactcattcagggcttc
gttgttgcgatgaacctcgagaccactgaagaagacctgatgcacacgatcttcccgcat
ccgacgatttcggagtcgatgaaggaaagcgtgctcgacgcctatgggcgtgtgctgaac
gcataa
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