Rhizobium oryzihabitans: G3A56_04780
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Entry
G3A56_04780 CDS
T06770
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_04780
Enzymes [BR:
roy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
G3A56_04780
DNA repair and recombination proteins [BR:
roy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
G3A56_04780
Prokaryotic type
G3A56_04780
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF5848
Motif
Other DBs
NCBI-ProteinID:
QIB37390
UniProt:
A0A7L5BET1
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Position
M15-11:877478..878917
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AA seq
479 aa
AA seq
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MPTTASPIIVWFRKDLRLSDNLALLAAVEHGGPVIPLYIQEESSGPLGGAQEWWLHHSLA
SLTVALEETGSRLLLRSGDAEETLRHVIRETGADTIFWNRRYDPAGMATDKALKQALSDD
GLTVRSFAGHLLHEPSRVQTKSGGPYRVYTPFWRALEGGEEPHAPADAPKSLKSPETWPK
SEKLDDWKLLPVKPDWARDFSEIWTPGENAAREKLDDFIDGALKGYEEGRDFPAKDATSM
LAPHLALGEISPAAVWHATKGLSRHIASNDISRFRKELVWREFCYHLLFHFPKLDEKNWN
DSFDAFGWRDDEKSFKAWTRGMTGYPIVDAGMRQLWKHGTMHNRVRMIVASFLIKHLLID
WRKGEKWFRDTLVDADPASNAANWQWVAGSGADASPFFRIFNPILQGEKFDSDGDYVRRF
VPELEKLDRKFIHKPFQAPRELLNKAGIELGKTYPQPIVDHTKARERALAAYAAVKNNA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccgacaacagcctcccccatcatcgtctggttccgcaaggacctgcgcctctcggac
aatcttgccctgcttgcagcggtggagcatggcggccccgtcatcccactctatattcag
gaagaatcctccggcccgctgggcggtgcgcaggaatggtggcttcaccattcgctggct
tccctcaccgtcgcactggaagaaaccggtagccgcctgctgctccggagcggtgacgcc
gaggaaacgctgcgccatgtgatacgcgaaactggcgccgacacgatcttctggaaccgc
cgctacgatccggcgggcatggcgacggacaaggcactgaaacaggcgctcagcgacgac
ggcctgacggtccgcagctttgccggacatctgctgcatgaaccatcccgggtacagaca
aaatccggcggcccttaccgggtctatacgcccttctggcgcgcgctggagggcggcgag
gagccacatgcgccggcggatgcaccaaagagcctgaaatcacctgagacatggccgaaa
tcggagaaactcgacgattggaagcttctgccggtcaaaccggactgggccagggatttc
agcgaaatatggacacccggcgaaaatgcggcacgggaaaaactcgatgatttcatcgac
ggcgctttgaagggttacgaggaaggtcgcgattttccggcgaaagacgccacctcgatg
cttgcaccgcatctggcgctcggcgaaatatcgcctgccgccgtctggcacgccacaaag
gggctttcccgccatatcgcctccaacgatatcagccggtttcgcaaggagctcgtctgg
cgggagttctgctaccacttgctgtttcatttccccaaactggacgagaagaactggaac
gacagtttcgatgccttcggctggcgggatgatgaaaaatccttcaaagcctggacgcgc
ggcatgacaggttaccccatcgtcgatgccggcatgcggcaattgtggaaacacggcacc
atgcacaatcgggtgcgcatgatcgtggcctccttcctcatcaaacatctgctgattgac
tggcggaagggtgagaaatggtttcgcgacacacttgtggatgccgatcccgcctccaac
gccgccaactggcaatgggtggcggggtctggcgcggatgcctcgccgtttttccgcatc
ttcaaccccatattgcagggtgaaaaattcgatagcgatggcgattatgtgcgccgcttc
gtgccggagcttgaaaagctcgaccggaaattcatccacaagccgtttcaggccccgaga
gaactgctgaacaaggcgggcatcgagcttggcaaaacctacccgcaaccgattgtcgac
cacacgaaggcgcgcgaaagagcgcttgcggcctatgccgcggtgaagaacaacgcataa
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