Rhizobium oryzihabitans: G3A56_12280
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Entry
G3A56_12280 CDS
T06770
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy02024
Quorum sensing
roy03060
Protein export
roy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
G3A56_12280 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
G3A56_12280 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G3A56_12280 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
roy02044
]
G3A56_12280 (ffh)
Enzymes [BR:
roy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
G3A56_12280 (ffh)
Secretion system [BR:
roy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
G3A56_12280 (ffh)
Eukaryotic Sec-SRP protein
G3A56_12280 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_30
AAA_33
AAA_22
AAA_19
DnaB_C
AAA_31
AAA
AAA_14
6PF2K
APS_kinase
AAA_7
Thymidylate_kin
AAA_5
AAA_18
ResIII
AAA_16
GTP_EFTU
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QIB38674
UniProt:
A0A7L5BIH7
LinkDB
All DBs
Position
M15-11:complement(2394712..2396280)
Genome browser
AA seq
522 aa
AA seq
DB search
MFENLQDRLGSILNGLTGRGALTEADVAAALREVRRALLEADVALEVVRSFTDRVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGTEGVSIDLHAAAPVVIMMVGLQGSGKTTTTGKI
AKRLTDREKKKVLMASLDTRRPAAQEQLRQLGVQTGVDTLPIIAGQSPTDIAARAVQAAK
LGGHDVVILDTAGRTHIDEPLMLEMADIKKKSNPHEILLVADSLTGQDAVNLARNFDERV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGIGERMNELDEFHPRRIADRILGMGDI
VSLVEKAAENIDAEKARSMAEKMAKGKFDLNDLADQLGQMKKMGGMGGIMGLMPGMAGMK
DKMASAGMNDKMFDRQIAIISSMTKAERANPDILKHSRKKRIAAGSGTDAAEINKLLKMH
RGMADMMKAMGGKGKGGIMKQMMGGLAGKMGLGGLGGGMPDLSNIDPKQLEALQKQAEAA
GLGKPGAMPGLGGLPGGLPGLGGAKLPGLGGMPGLPGFPKKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctccaggaccgccttggttccattctgaatggactgaccggccgtggc
gcgctgacggaagccgacgttgccgccgccctgcgcgaggttcgccgtgcgcttctggaa
gcggacgttgcgctggaagtcgtgcgttccttcaccgacagagtgcgtgaaaaggctgtt
ggtgccgccgtcctgaagtccatcaagcctggccagatggtcgtcaagatcgtgcatgac
gaacttgtcgagatgctcggcaccgaaggcgtctcgatcgacctgcatgcggccgccccg
gtcgtcatcatgatggtcggtctgcagggttcgggcaagaccaccaccaccggcaagatc
gccaagcgcctgacggaccgcgagaagaagaaggtgctgatggcatctctcgacacgcgc
cgtcccgcagcccaggaacagcttcgccagctcggcgtgcagaccggcgtcgacacgctg
cccattatcgccggccagtcgccgaccgatatcgccgcgcgtgccgtgcaggctgcaaaa
ctcggcggccatgacgtcgtcattctcgacaccgccggccgcacccatatcgacgaaccc
ttgatgctggaaatggccgacatcaagaagaagtccaacccgcatgaaatcctgctggtc
gcggattcgctgaccggtcaggacgccgtcaatctcgcgcgcaatttcgatgagcgcgtc
ggcatcaccggcctcgtgctcacccgtatggatggcgatggacgcggcggcgcggccctc
tccatgcgcgccgttaccggcaagccgatcaagctgatcggtatcggcgagcgcatgaac
gaactcgacgagttccatccgcgccgtatcgccgaccgtattctcggcatgggtgacatc
gtctcgctggtcgagaaggccgccgaaaacatcgatgcggaaaaagcccgctccatggcc
gagaaaatggccaagggcaagttcgacctcaacgatctcgccgaccagcttggccagatg
aagaagatgggcggcatgggcggcatcatggggctgatgcccggcatggccggcatgaag
gataagatggcttcggccggcatgaacgacaagatgttcgaccgccagatcgccatcatc
tcctccatgaccaaggcggaacgcgccaatcccgatattctgaagcacagccgcaagaag
cgcatcgccgccggttccggcacggatgccgctgaaatcaacaagcttctgaagatgcat
cgcggcatggccgacatgatgaaggccatgggcggcaagggcaaaggcggcatcatgaag
cagatgatgggcggccttgccggcaagatgggcctcggtggccttggcggcggcatgcct
gatctgtcgaatatcgatccgaagcagcttgaagcgctccagaagcaggctgaagccgcc
ggtctcggcaagccgggcgcaatgcccggtcttggtggtctgccgggcggattgccgggt
ctgggtggcgccaagctgcccggtcttggcggcatgccgggcctgcccggctttccgaaa
aagaagtga
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