Rhizobium oryzihabitans: G3A56_12380
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Entry
G3A56_12380 CDS
T06770
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roy03016
]
G3A56_12380 (thpR)
Enzymes [BR:
roy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G3A56_12380 (thpR)
Transfer RNA biogenesis [BR:
roy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G3A56_12380 (thpR)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QIB38693
UniProt:
A0A7L5BIW4
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All DBs
Position
M15-11:2416982..2417575
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDIDGRTADEVVDRLDR
IERPEFQLNLTGMGSFGSKKPHSIWAGVSPSPEMHALQAEVERICQRIGLPPDPRKFMPH
VTLARLRSSRLDDVVHYLSGRGNFRTSPFTVGRFVLMSSKESVGGGPYIVEEAFPLHEAR
SNSIFSSNELHPAKSML
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggctatgagcctctcattg
ttgcgcggtggtctgccgggagcccggtggatcgatgtggagaattatcacataaccctg
cgttttatcggtgatatcgacgggcggaccgccgatgaggtcgttgaccggctggatcgg
atcgaaaggccggaattccagctcaatctcaccggcatgggttccttcggttccaagaaa
ccgcattccatctgggcaggggtttccccctcaccggaaatgcatgcgctgcaggccgag
gtcgagagaatttgtcagaggatcggtctcccacccgatccgcgcaaattcatgccacat
gtgacgctggcgcggctgcgctcctcgcgtctggacgatgtggtgcattatctttccgga
cgcggcaacttccgcacctcgcccttcacggtcggccgtttcgtgctgatgtcgtcgaag
gaatcggtgggcggcgggccctatatcgttgaagaggcgttcccgcttcacgaggcgcga
tccaactccatcttttcgagcaacgagctgcatcccgccaaaagcatgttgtag
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