Rhizobium oryzihabitans: G3A56_12560
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Entry
G3A56_12560 CDS
T06770
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00020
Citrate cycle (TCA cycle)
roy00190
Oxidative phosphorylation
roy00650
Butanoate metabolism
roy00720
Other carbon fixation pathways
roy01100
Metabolic pathways
roy01110
Biosynthesis of secondary metabolites
roy01120
Microbial metabolism in diverse environments
roy01200
Carbon metabolism
Module
roy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G3A56_12560
00650 Butanoate metabolism
G3A56_12560
09102 Energy metabolism
00190 Oxidative phosphorylation
G3A56_12560
00720 Other carbon fixation pathways
G3A56_12560
Enzymes [BR:
roy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
G3A56_12560
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QIB38725
UniProt:
A0A7L5BIT2
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Position
M15-11:2448168..2450009
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AA seq
613 aa
AA seq
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MASISSPSQNGKAYTYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTV
AAQGGIAASLTNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYGVPFS
RNAEGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFIEYFA
LDLIMSADGRCTGVVAWNLDDGTIHRFSAKMVVLATGGYGRAYFSATSAHTCTGDGGGMI
ARAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTMEIREGRGVGKNKDHIFLHLDHLDPAILHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADANNPERIAPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAAQVIDRDAAVPALDIAACDRIMERFDSLRYANGSTPTAVLRDKMQRAM
QDDAAVFRTQESLESGCQRISAIWKELPDVKVTDRSMVWNSDLVETLELHNLMANAITTV
YGAEARKESRGSHAREDFVDGPFGGRDDVNWRKHTLAWVSPEGDVKLDYRPVHTDLIADG
IDPKKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgatcagttcaccttcccagaatggcaaggcttacacctatgtcgatcactcc
tatgacgtgatcgtggtgggcgccggcggcgcgggtctgcgcgcaacgctcggcatggcg
gaacagggtttccgcacggcctgcatcaccaaggttttcccgacgcgctcgcacacggtc
gcggcgcagggcggcatcgctgcatcgctcaccaatatgacgcccgactgttggcagtgg
cacctttacgacaccgtaaagggctccgactggctgggtgacgttgacgcgatgcaatat
ctcgccatggaagcgccgaaggcggtctatgagctggagcattatggcgtgcccttctcg
cgcaatgccgaaggcaaaatctaccagcgcccgttcggcggtcacatgcagaactacggc
gaaggtccgccggtacagcgcacctgcgctgccgccgaccgtaccggccatgccattctg
cacacgctttatggccagtcgctgcgcaacaatgcggaattcttcatcgaatatttcgcg
ctcgacctcatcatgtcggcagatggccgctgcaccggcgtcgtggcgtggaacctcgat
gacggcacgatccatcgcttctccgccaagatggtggtgctggcgaccggcggttacggc
cgcgcctatttctcggcaacctcggcccatacctgcacgggtgacggcggcggcatgatt
gcccgtgccggcctgccgcttcaggatatggagttcgtgcagttccacccgaccggcatc
tacggcgcgggttgcctgatcaccgaaggcgcacgcggcgaaggcggttatctcgtcaat
tccgaaggcgagcgcttcatggagcgttatgcgccttctgcgaaggaccttgcctcgcgt
gatgtcgtgtcgcgctgcatgacgatggaaatccgtgagggccgcggcgtcggcaagaac
aaggaccacatcttcctgcatctcgatcacctcgatcctgcgatcctgcatgagcgtctt
ccgggcatttccgaaagcgccaagattttcgctggcgttgacgtgacgcgtgagccgatc
ccggttctgccgacggttcactacaatatgggcggtattccgaccaattattggggtgaa
gtgctgaatgctgatgccaacaacccggaacgcatcgcacccggcctgatggctgtcggc
gaagctggctgcgcctcggtgcacggcgccaaccgcctcggctccaactcgctgatcgac
cttgtggtcttcggccgcgccgctgctatccgcgccgctcaggtcatcgaccgcgatgcg
gcggttcctgcgctcgatatcgctgcctgcgacaggatcatggaacgcttcgacagcctg
cgttatgccaatggctcgacgccgacggcggtgctgcgcgacaagatgcagcgcgccatg
caggacgatgcggccgtgttccgtacgcaggaatcgctggaaagcggttgccaacgcatt
tccgccatctggaaagagctgcctgatgtcaaggttaccgaccgttcgatggtctggaac
tccgatctggtggagacgctcgagctgcacaatctgatggccaacgcgatcaccacggtc
tacggcgcggaagcgcgcaaggaaagccgcggctcgcatgcccgcgaggatttcgtcgat
ggtccgttcggcggtcgcgacgatgtgaactggcgcaagcacacgcttgcctgggtcagc
cccgaaggtgacgtcaagctcgactaccgccctgttcataccgacctgatcgccgacggc
atcgatcccaaaaagatcgagccgaaggctcgcgtctactga
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