Rhizobium oryzihabitans: G3A56_12590
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Entry
G3A56_12590 CDS
T06770
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00020
Citrate cycle (TCA cycle)
roy00640
Propanoate metabolism
roy00660
C5-Branched dibasic acid metabolism
roy00720
Other carbon fixation pathways
roy01100
Metabolic pathways
roy01110
Biosynthesis of secondary metabolites
roy01120
Microbial metabolism in diverse environments
roy01200
Carbon metabolism
Module
roy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G3A56_12590 (sucD)
00640 Propanoate metabolism
G3A56_12590 (sucD)
00660 C5-Branched dibasic acid metabolism
G3A56_12590 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
G3A56_12590 (sucD)
Enzymes [BR:
roy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
G3A56_12590 (sucD)
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GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QIB38731
UniProt:
A0A7L5BIM4
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All DBs
Position
M15-11:2455195..2456097
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AA seq
300 aa
AA seq
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MSILVNKDTKILVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGSKGESLPIF
ATVAEAKEKTGADASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR
SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADDATQSIIMIGEIGGSAEEDAAQFLIDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMEAAGIKVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcttgttaataaagacacgaagatccttgttcagggtctgaccggcaagacc
ggcaccttccacaccgaacaggcgcttgcttattacggcacgcagatggtcggcggtatt
cacccgaagaagggtggcgaaacctggaccggttccaagggcgaaagcctgccgatcttt
gcaacggttgcagaagccaaggaaaagaccggtgcagacgcatccgtgatctacgttccg
ccggcaggtgcagccgatgccatcatcgaagccatcgatgcggaaattccgttcatcacc
tgcatcaccgaaggtatcccggtcatggacatggttcgcgtcaaggctcgcctcgaccgc
tccaagtcgcgcctgctcggcccgaactgcccgggtatcctgacgccggaagaatgcaag
atcggcatcatgccgggctccatcttccgcaagggttcggtcggtatcgtttcccgttcg
ggcacgctgacctatgaagccgtgttccagacctccaacgaaggcctcggccagaccacg
gctgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtcttggaaatg
ttcctcgccgacgacgccacccagtcgatcatcatgatcggtgaaatcggcggctcggct
gaagaagatgcggcgcagttcctgatcgacgaagccaagaagggccgcaagaagccgatg
gccggcttcatcgcgggccgtacggctccgaagggccgcaccatgggccacgccggcgct
gtcgtttccggcggcaagggtgacgcagagtccaagattgcagcaatggaagctgccggt
atcaaggtatcgccttccccggcgcgcctcggcaagacgctggttgaagtcctcaagggc
tga
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