Rhizobium oryzihabitans: G3A56_15610
Help
Entry
G3A56_15610 CDS
T06770
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy03420
Nucleotide excision repair
roy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3A56_15610
03430 Mismatch repair
G3A56_15610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_15610
Enzymes [BR:
roy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3A56_15610
DNA repair and recombination proteins [BR:
roy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3A56_15610
MMR (mismatch excision repair)
Other MMR factors
G3A56_15610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Peptidase_M13
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
QIB39249
UniProt:
A0A7L5BK49
LinkDB
All DBs
Position
M15-11:complement(3113627..3116101)
Genome browser
AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATKNEGAADGGGLGIAARAMAARDQTRAAPDYLAGLNPEQ
REAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELIGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLLHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGTAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKNHKLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAATDIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESMRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKAEPFANN
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADTPSKF
VVGDRVFHIKFGNGNISAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgacgaagaacccgtggcgccacgcagg
gcgacgaaaaatgaaggcgcggcggacggcggcggcctcggcattgccgcgcgtgccatg
gcggcgcgcgatcagacccgcgcggctcccgactatcttgccggtctcaacccggagcag
cgcgaggccgtggaaacgctggatggcccggttctggtgcttgcgggtgccggcaccggc
aagacccgcgttctgaccacccgcatcgcccatattctggccaccggccgtgcctacccc
agccagatccttgccgtgaccttcaccaacaaggcggcgcgcgagatgaaggaacgtatc
ggcgttctggtcggcggcgcggttgaaggcatgccctggctcggcaccttccactccatc
ggcgtcaagcttctgcgtcgccatgccgaactcatcggcctgaagtctgatttcaccatt
ctcgataccgacgatgtggtgcggctaatcaagcagctcatccaggccgaaggtctggat
gacaagcgctggcccgcaaagcagttcgccggcatgatcgacggttggaagaacaagggg
ctgacgccgccggatattccggagggcgacagccgcgccttcgccaatggcaagggccgc
gagctttacaccgcctatcagaaccggctgaagacgctgaacgcctgtgacttcggcgat
cttctgctgcacccgatcagcatcttccgccgccacaccgatattctgaaggagtatcac
cagaagttccgttacatcctggtggatgaatatcaggacaccaacacggcgcaatatatg
tggctgcggcttctcgcacagcgcgccaagggcgagccgcagaacgtctgttgtgttggt
gacgacgaccagtcgatctatggctggcgtggagccgaagtggacaatatcctccgcttc
gacaaggatttccccggcgccaaggtcatcaagctcgaacgcaactaccgctccaccgag
catattctcggcaccgccggccatctgatcgcccataatgaggggcgtctcggcaaaacg
ctgttcaccgaacgcagcagccccgacgatgaaaaggtggtcgtgcatgcggcatgggat
tccgaagaggaagcccgcgccgtcggcgaggaaatagagcagctccagcgcaagaaccac
aagctgaacgacatggccattctcgttcgcgcctccttccagatgcgcgaattcgaagac
cgcttcgtcacgcttggcctcaactatcgcgtcatcggcgggccccgcttctacgagcgt
ctcgaaatccgcgatgcgatggcctatttccggctcgtgtgccagccggccgacgatctg
gccttcgagcgtatcgtcaatacgccgaagcgcggccttggcgatacgaccatccgcaat
ctgcatgattacgcccgcgcccgcgatattccgatgctggctgcggcaaccgacatcatc
gaaaccgacgagctgaaacccaaggcgcgcaaagcgctgttcgatgtggtacaggatttc
cgccgctggcagggtcttcttgaaaacaccgagcacaccacacttgccgagcagatcctt
gacgaaagcggctataccgccatgtggcaggccgacaagacggccgaagcgcccggacgg
ctggaaaacctgaaggaactcatccgctcgatggaagccttcgaaagcatgcgcggcttc
ctcgagcacgtcgccctcgtcatggatgccgagcagaacgaaaatctcgatgccgtgtcc
atcatgacgctgcattccgccaagggtctggaattcgataccgtcttccttcccggctgg
gaagaaggcctgtttccgcaccagcgggcgctggacgaaggtggccgctccggtctggag
gaagaacgccgcctcgcttatgtcggcatcacgcgcgccaagaagctctgccatatctgg
ttcgtgtcgaaccgccgcattcatggcctgtggcaatccaccctgccctcccgtttcctc
gacgaattgccgcccgcccatgtggatgttgcggcatccgacagcaattacggcggttat
ggcggacgcggcggctacggccagtcccgtttcgacaaagccgaacccttcgccaataat
tattccacccccggctggaaacgcgcgcagcagaaccgctccgacgcgacccgcgacaat
tggggcacgcgctccggccatgcggtggagcggatcggttatggcgaaagcggcccgcgc
acccgcacgatcgacggcgaactggtagcgaaatccgtcgccgatacaccgtcgaaattt
gtggtcggcgaccgcgtttttcacatcaagttcggcaatggcaacatctccgccatcgaa
ggcaacaagctgaccatcgattttgaccgcgccggacaaaagcgcgtgctggatggattt
gtggaaaaggtttga
DBGET
integrated database retrieval system
