KEGG   Rhizobium oryzihabitans: G3A56_16280
Entry
G3A56_16280       CDS       T06770                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
roy  Rhizobium oryzihabitans
Pathway
roy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:roy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    G3A56_16280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roy03400]
    G3A56_16280
DNA repair and recombination proteins [BR:roy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     G3A56_16280
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QIB39551
UniProt: A0A7L5BKZ0
LinkDB
Position
p1:complement(25168..26067)
AA seq 299 aa
MVAPRANWKGFIKFGEVACPVALYTAASSSERIAFNTLNRRTGNRVKREFIDSETGDPVE
RDAQVKGYEIENGQYIVLEPDEVAAAVPHSDKTLKIDAFIPCSEIDSVYFDKPYYLAPDR
MGTDAFVLLRDGMKRAKVAAIARTVLFRRLRTVLIRPHGKGLIATTLNFDYEVRSSAEAF
EELPDLKIEGEMLEFAEHIIGTKKGTFDASTFDDRYEAAVAELVKAKIEGRALPKKKAAA
VPRQNDLLQALRESAGMGTKSGQKRAVSNANKSAGRQKASKPGAAAKSNAVSSQTRRAG
NT seq 900 nt   +upstreamnt  +downstreamnt
atggttgccccgcgagcgaactggaagggctttatcaaatttggagaagtcgcgtgtcct
gtggctctctatactgcggcatcatcatctgaacggattgctttcaacaccctcaatcgc
cgaaccggcaaccgggtgaaacgcgaatttatcgacagcgagaccggcgatccggtggaa
cgggacgcccaggtcaagggctatgagatcgagaacggccagtatatcgttctcgagccg
gacgaggtggctgccgccgtgcctcacagcgacaagacgctgaagatcgacgccttcatc
ccctgcagcgagatcgacagcgtctatttcgacaagccctattatctggcgcccgacagg
atggggacggacgctttcgtacttttgcgcgatggcatgaaaagagccaaagttgctgcg
atcgcccgcaccgtgctcttccgacgcttgcgtacggtgctgatcaggccacacgggaag
ggcctgatcgccacgacgctcaactttgactatgaagtccgctcgtcggcggaagccttc
gaggagttgccggacctcaagatcgaaggcgagatgcttgagtttgccgagcacattatc
ggcacaaagaaggggaccttcgatgccagcacgttcgacgaccgatatgaagccgccgtt
gccgagctggtgaaggccaagatcgagggcagggccctgccgaagaagaaggccgcagcc
gtccccaggcaaaacgaccttttgcaggcgctgcgtgagagtgctggcatgggcaccaaa
tccggccagaaacgcgccgtttctaacgccaacaagagtgccggccgtcagaaggcttcg
aaaccgggtgctgctgccaaatcaaatgcggtctcgtcacagacgcgccgcgccggctga

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