Rhizobium oryzihabitans: G3A56_17060
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Entry
G3A56_17060 CDS
T06770
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roy02000
]
G3A56_17060
Transporters [BR:
roy02000
]
Other transporters
Pores ion channels [TC:
1
]
G3A56_17060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl
Plug
STN
Autotransporter
OMP_b-brl_3
OmpA_membrane
Opacity
DUF5777
OMP_b-brl_2
Motif
Other DBs
NCBI-ProteinID:
QIB41132
UniProt:
A0A7L5BQG2
LinkDB
All DBs
Position
M15-12:43888..47427
Genome browser
AA seq
1179 aa
AA seq
DB search
MRLAAFCASLACSVSFQAHTQAHAQELRQFSIPAGPLDVALTRFGAASGIQILYDASLTK
GLKTSGAAGALQPRDALGKLLDGTGLSFRFTAPDRVTVSNASQAQEATSADGSLVLETIT
VTGKSGRYGSPDAPYGTDAPTAYISGEDIDRFRGSSPADMFRGTAGVMSGEARNGAGAID
VNIRGMQGMGRVATTIDGAENSVTVYQGYQGVSNRTYVDPDFIAGVDITKGADAASFGNA
GSVAMRTVSADDIVKDGEKWGLKVKGGFGTNSSSPKDGALGGYSYQSGVGTATPSADGMD
RPAFLKPTTGSGSVIGAYKGEDIDVVAGYAHRRQGNYHAGSHGPVASPKNIGNTKYWGGI
LPNTMINEGLVNYRGGEEVLNTELETQSLLAKVTARLSDDQTFQIGYMGYRSEAGDRLAS
RLTSNTGQAQQQEQTVSTSLDTFTARYNWNPEDNDLIDFKSNFYFNHLEVRNPVRGGRGL
TPEKIGLPSGFRVGTDTNMWGAEITNRSQFSSDYGDLDLNYGISYRAEDTNGSEHAAVLE
GWLTPRDAIRHEGAAFAKAAYKPVDWLTLNGGLRYSHYWLKDRFDPYEKYQAQGKPIGLT
VDDGGFSPSAGVTVEPFDNTQFYANYSNTLRSPSIIESVSAFNSVIANAGVQPERSSNWE
IGTNIIRDGILSDDDTAMIKFGYFNWDVKNYISRTVVTEPVLTLNIGNIPRAKFSGLELS
GRYTNGGFSADLSANYFLNVEYCRTTQTCDSKSLYGDYATNHVQPEYTVDLTLSQKFLED
RLTVGGRISYVGPRAIGHGDVTAQGASEFIALVDWEPYTLVDLFTEYKINDNMTASLRVE
NLFDRFYVDPLGLVTQPGPGRTIYASLTATIGGGEALPGLSPFSSPTDSAFVRDWTGFNV
GAHAGGDFLNIAGNTTSLDGTFSDAAARESADFNMRGGAFGLHAGYDRQLENGFVVGVEA
DYTKTYLRGIEKFASTDATLAKNGHVDATTSYDIDWTAGLRAKLGYAVNDRLLVYSTAGL
ALARETQWRDQYVSDSASATNPMGSETTAFFVEKASGTRTGFTIGLGAEYALNENWSIRA
DYSYSHFRAKSFKFKNARAGTGKDYQTSEQTGTEMIDPGLANDPNMAWLCAIYPEVCAPY
ESPVYEYVDHAGTSGIANGRNASNSLNMHAIKVGLNYRF
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
ttgaggctggcggcattctgcgcatcgctggcatgctccgtctctttccaggctcacacc
caggctcatgcgcaggagctgcgccagttttccattcccgcgggccctctcgacgtggcc
ctgacgcgatttggcgcggcgagcggcatacagattctctacgatgcgtctttgacgaag
gggctgaaaacctccggcgcagccggtgcccttcagccgcgcgatgcgctcggcaagctt
ctggacggcaccggcctgagcttccgcttcacggcacccgatcgcgtgacggtctccaac
gcatcgcaggcgcaggaggcgacctcggcggacggttcgctcgtgctggaaacaatcacc
gtcaccggcaaaagcgggcgatacggcagccccgacgcaccctacggaaccgacgcgccg
acggcctatatttcgggcgaggatatcgaccgcttccgcggctcaagccctgccgacatg
tttcgcggcacggctggcgtcatgtctggcgaggcgcgcaacggcgcgggcgccatcgac
gtcaatattcgcggcatgcagggaatgggccgcgtcgccaccacgatagacggcgccgag
aattccgtgacggtctatcagggctatcagggcgtctcgaaccgcacctatgtcgatccc
gatttcatcgccggcgtcgacattaccaagggggcagacgccgcttccttcggcaatgcc
ggctcggtcgcgatgaggacggtcagtgccgatgacatcgtcaaggacggtgaaaaatgg
ggcctcaaggtcaagggcggttttggcaccaattcttcaagcccgaaggatggcgcgctg
ggcggctacagctatcagtccggcgtgggcaccgcgacaccatctgccgacgggatggat
cgccccgccttcctcaagccaacgaccggctcgggcagtgtgatcggcgcctataagggc
gaggacatcgatgtcgttgcgggttatgcgcatcgtcgccagggcaattatcacgccggc
agccacggccccgtcgcctccccgaaaaacatcggcaatacgaaatattggggcggcatt
cttcccaacacgatgatcaatgaaggcctggtcaactaccgagggggcgaggaagtcctc
aacaccgagctggaaacgcaatctcttctggcaaaagtgaccgcgcgcctttcggacgac
cagacattccagatcggttatatgggatatagaagcgaggccggggaccggcttgcctcg
cggctgacctcgaataccggacaggcgcagcaacaggagcagacggtcagcaccagcctc
gacacgttcacggcgagatacaactggaaccccgaggataatgatctcatcgacttcaag
tcgaatttctacttcaaccatctcgaagtccgaaatcccgtgcgcggcgggcgaggactg
acgcccgaaaaaatcggcctgccatccggtttccgggtcggcaccgacaccaatatgtgg
ggagcggaaattaccaaccgctcgcaattcagctcggattacggtgacctcgatctgaac
tacggcatttcctaccgggccgaggacaccaatggcagcgagcacgccgctgttctcgag
gggtggctgacgccgcgcgatgccattcgtcatgaaggtgccgctttcgcaaaggcagcc
tacaagcccgttgactggctgaccctgaatggcggcctgcgatactcgcattattggctc
aaggatcgatttgatccttacgaaaaatatcaggcccagggcaaacccatcggcctgacg
gtggatgacgggggtttcagcccgtctgccggcgtgacggtggaaccgttcgacaatacg
cagttctacgccaactattcgaatacgctcagatcgccatccatcatcgaatccgtctcc
gccttcaacagcgtgatcgccaatgccggcgtccagccggaacggtccagcaactgggaa
atcggcaccaacatcattcgcgacggcattctgtccgacgacgataccgccatgatcaag
ttcggttatttcaattgggacgtgaagaattacatatcgcgcacggtggtgaccgaaccg
gtgctgaccctcaatatcggcaacattccccgggctaaattttcaggtctcgaactctcc
ggccgttacaccaatggcggcttttcggcggacctttcggccaattatttcctgaacgtc
gaatattgccgcacgacccagacctgcgacagcaagtccctctacggcgactatgcgacc
aaccatgttcagccggaatatacggtggacctgacgctctcgcagaaattcctcgaggac
cggctgacggtcggcggccgcatctcttatgtcgggccgcgcgccatcggacatggcgat
gtcacggcgcagggcgcctccgaattcatcgctctcgtggactgggaaccctatacgctg
gtcgacctgtttaccgaatacaagatcaacgacaacatgaccgcgagcctgcgcgtggaa
aacctgttcgatcgtttctatgtcgatcctctcggccttgtcacacagccgggaccgggc
cggacgatctatgccagcctcacggcaaccattggcggcggcgaagccctgcccggcctc
tcccccttcagcagcccgacggacagcgccttcgttcgcgactggaccggctttaatgtg
ggtgctcatgcgggcggcgatttcctgaatatcgcaggaaatacgacctctctggatgga
acgttcagcgatgcagccgcgcgggaatctgccgatttcaacatgcgcggcggcgcattc
gggctgcatgcgggttatgaccggcagctcgaaaacggctttgtcgtcggcgtcgaggcc
gattacaccaaaacctatcttcgcggcatcgaaaagttcgcctccaccgatgccacactg
gcgaaaaacgggcatgtggacgcaaccaccagctacgacatcgactggactgccgggctg
cgcgcaaaactcggatatgccgtcaacgacaggctgctggtttattcgaccgccggtctg
gcgcttgcccgggaaacccaatggcgcgaccagtatgtctcagacagtgcgagcgctacc
aaccccatgggttccgaaacaacggcattcttcgtagagaaggcttcgggcacgcgaacc
ggcttcaccatcgggctcggcgcggaatatgccttgaacgaaaactggtcgatcagggcg
gattacagctacagccatttccgcgccaagtccttcaagttcaagaatgcccgcgccggc
accggcaaggactaccagacgagcgagcagaccggcaccgagatgatcgaccccggtttg
gccaatgatcccaatatggcctggctttgcgccatctatccggaagtttgcgctccctat
gaatcgccggtttacgaatatgtcgaccacgccggcacttcgggaatagcaaacggccgc
aatgcctcgaattcgctgaacatgcatgccatcaaggtcgggctgaactatcgcttctga
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