Rhizobium oryzihabitans: G3A56_22370
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Entry
G3A56_22370 CDS
T06770
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roy03032
]
G3A56_22370
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_22370
Enzymes [BR:
roy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G3A56_22370
DNA replication proteins [BR:
roy03032
]
Prokaryotic type
DNA Topoisomerases
G3A56_22370
DNA repair and recombination proteins [BR:
roy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3A56_22370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QIB40596
UniProt:
A0A7L5BPP7
LinkDB
All DBs
Position
M15-12:complement(1212341..1213357)
Genome browser
AA seq
338 aa
AA seq
DB search
MPQPTTRLLAKIGLAYVNDQEPGIAREKRGRGFCYRLPGGELLSDSVELKRIKSLGVPPA
YRDVWICIDPAGHLQATGFDARGRKQYRYHPDWHAMRGETKFFQLKSFGKALPAIRRRAI
ADIERQDHGQEMTLAALTLLLDAAYLRVGNRSYLETNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSEDRVHSVDSSDLNAYLSRIGGQ
GISAKTFRTWGGTLAAFCHAMEHVAAGEKPSIKGMCQAAAIELSNTPAICRKSYVHPAVL
DIATEEKAQKKLGRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccaaccacccgccttcttgccaaaatcggacttgcctatgtcaacgatcag
gaaccggggatagcccgcgaaaagcgcgggcgcggtttctgttaccggctgccgggtggc
gaactcctgtccgatagcgttgaattgaagcgcatcaagtcgctcggcgtaccacctgcc
tatagagacgtctggatatgtatcgatcccgccgggcatttgcaggccacgggcttcgat
gcgcgcgggcgaaagcaatatcgttaccatcccgactggcacgccatgcggggcgagacg
aaattcttccagctgaaaagcttcggcaaggcgctgcccgccatccgccgtcgtgccatc
gccgatatcgaaaggcaggatcatgggcaggagatgacgctcgccgcccttacactgctt
ctcgatgccgcgtatctgcgcgtcggcaaccgctcctatctcgaaaccaacggcacctat
ggcgcaaccaccttgctcaaacggcacgtgtctttcggtgaaaccatcgagctgcggttt
gccgcaaagggcgggcaaaaggtgaagcgccagctgcgccacccccgccttcagaaaatc
ctcgaagaaatcgccgatctgccgggcaaggagctgtttgtctggcaggacagcgaagac
cgcgtgcattccgtcgattcaagcgatctcaacgcctatctttcccgcattggcggtcag
ggcatctccgccaagaccttccgaacctggggcggcaccctggccgccttctgccatgcg
atggagcatgtggcagccggtgaaaaacccagcatcaagggcatgtgccaagcagcggcg
atcgagctttccaatacgcccgccatctgccgcaagagctacgtccaccctgccgttctc
gatatcgcgacggaggagaaggcgcagaagaagcttggccgcatcctgaaggtcggggca
aagcccgtttccggcctcagggcggatgaaagacggctgcttgccttcctgccctga
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