Rhizobium oryzihabitans: G3A56_24910
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Entry
G3A56_24910 CDS
T06770
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy03420
Nucleotide excision repair
roy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G3A56_24910
03430 Mismatch repair
G3A56_24910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_24910
Enzymes [BR:
roy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G3A56_24910
DNA repair and recombination proteins [BR:
roy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G3A56_24910
MMR (mismatch excision repair)
Other MMR factors
G3A56_24910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
HHH
AAA_12
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIB41025
UniProt:
A0A7L5BQI7
LinkDB
All DBs
Position
M15-12:complement(1812524..1814590)
Genome browser
AA seq
688 aa
AA seq
DB search
MAVAYLDKLNEQQRKAVEHGVGLSDGHTAGPLLIIAGAGSGKTNTLAHRVAHLIVNGADP
RRILLMTFSRRAASEMSRRVERICKQVIGTNAGTLTDALAWSGTFHGIGARLLRIYAEQV
GLNVDFTIHDREDSADLMNLARHELGFSKTESRFPTKGTCLAIYSRAVNSQTPLKEILRQ
HYPWVSSWEAELKQLFAAYVEAKQAQNVLDYDDLLLYWAQMVSDPDLAGDIGDRFDHVMV
DEYQDTNRLQASVLMALKPGGRGLTVVGDDAQSIYSFRAATVRNILDFPASFSPAADIIT
LDRNYRSTQPILAAANSVIDLARERFTKNLWTERQSLERPKLVTVKDETEQANFIIDQVL
ANRETGMTLKQQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDSAHVKDMLAVLRFA
QNPRDRVAGFRLLQMLPGIGPKKAGSILDTIAADPEPLLALAEIPPPPKTGDDWVSFVQL
LANLRKSHGGWPSDIEHARLWYEPHLERIHEDAETRKADLLQLEQIAGGYPSRERFLTEL
TLDPPDATSDQAGVPLLDEDYLTLSTIHSAKGQEWRSVFILNVVDGCIPSDLGVGSTHEV
EEERRLLYVAMTRAKDSLSLITPQRFFTHGQNAQGDRHVYAARTRFIPATLLQFFETATW
PLVSAAASERSAQQIRIDVGARMRAMWK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcctatctggacaaactgaacgagcagcagcgcaaggccgtggaacatggc
gttggactttcagacgggcacacggccggaccattgctgatcatcgccggcgccggttcg
ggcaagaccaacacgctggcgcaccgggtggcgcatctgatcgtcaatggcgccgatccc
cgccgaatcctgctgatgaccttttcacgccgcgccgcttccgaaatgtcgcgccgtgtc
gagcggatatgcaaacaggtcatcggcaccaatgccggaaccctgacggatgcgctggcc
tggtccggcacgtttcacgggatcggcgcgcgcctcctgcggatttatgcggaacaggtc
gggctgaacgtggacttcaccatccatgaccgcgaagacagcgccgatctgatgaacctt
gcccgtcacgagctgggcttctccaagaccgagagccgttttccaaccaagggaacctgt
cttgcgatctattcgcgcgccgtcaactcgcagacgccgttgaaggaaatcctgcgccag
cattatccatgggtctccagctgggaagccgagctcaagcaattattcgccgcctatgtg
gaggccaagcaggcccagaacgtgctcgattatgacgatcttctgctttactgggcccag
atggtcagcgatcccgacctggccggcgatatcggcgatcgtttcgaccatgtgatggtc
gacgaatatcaggataccaaccggctgcaggcctcggtgctgatggcgttgaaaccgggc
ggtcgcgggctgaccgtggtgggtgacgacgcccagtcgatctattccttccgggcagcg
acggtacgcaatatcctggatttcccggcatccttcagcccggccgccgacattatcacc
cttgatcgcaactatcgctcaacgcagccgatactggctgcggccaacagcgtcatcgac
cttgcccgtgagcggttcaccaaaaacctctggaccgaacgacagtcactcgagcgaccg
aagctcgtgacggtaaaggacgaaaccgagcaggcgaacttcatcatcgaccaggtgctg
gccaatcgtgagaccggcatgacactgaagcagcaggcggtgctgtttcgcacctccagt
cacagcggcccgctcgagatcgagctgacacgccgcaacattcccttcgtcaaatttggc
ggcctgaagtttctcgacagcgcccatgtgaaggacatgctggcggtattgcggttcgcg
cagaacccgcgcgaccgggttgccggtttccggcttctccagatgctgccgggtatcggc
ccgaaaaaagccggcagtattctcgatacgatcgcagcagaccccgagccattgctcgcc
cttgccgaaattccgccaccacccaaaaccggcgatgactgggtatccttcgttcaattg
ctggcgaacctgcgaaaatcgcacggtggctggccatcggatatcgagcacgcgcggctc
tggtacgagcctcatcttgagcgcatccatgaggatgcggagacccgcaaggccgatttg
ctgcaacttgagcagattgccggcggctacccctcccgtgaacgtttcctgaccgaactg
accctcgatccgccggatgccaccagcgaccaggcgggcgtgccgcttctcgatgaggat
tacctgaccctttcaaccattcattcggccaaaggccaggaatggcgttccgtcttcatc
ctgaatgtggtcgatggctgcatcccctctgatctcggcgtcggctccacgcatgaagtc
gaggaagaacgccggctgctttatgtcgccatgacacgcgccaaggacagcctgtcgctg
ataacgccgcaacggttcttcacccatggccagaatgcgcagggagaccggcatgtttac
gcggcaagaacccgcttcataccggcaactctgttgcaattcttcgaaaccgccacctgg
ccgctggtttcggccgctgcctccgagcgcagcgcgcagcagatccgcatcgatgtcggc
gcgcggatgcgagcaatgtggaagtaa
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