Rhizobium oryzihabitans: G3A56_27190
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Entry
G3A56_27190 CDS
T06770
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00330
Arginine and proline metabolism
roy00480
Glutathione metabolism
roy01100
Metabolic pathways
roy01110
Biosynthesis of secondary metabolites
roy04148
Efferocytosis
Module
roy_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
G3A56_27190 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
G3A56_27190 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
G3A56_27190 (speC)
Enzymes [BR:
roy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
G3A56_27190 (speC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QIB41470
UniProt:
A0A7L5BRF7
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Position
p5:321309..323561
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AA seq
750 aa
AA seq
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MTIPVTEYFRILVVGTQYGDRIAQLIEDHLDFKTTVCGDEEAASAIHGGADLGAIVTSRA
AAEAVIKARAERGFRMPVFLLSRREDEKFGEPYLKDLEGIFIADLETREFYEKRLRASVE
AYAATLLTPFFGELMKYDYDANRAWACPGHQGGQFFMHHPAGRLFYEHMGENVFRDDICN
AMVSLGDLLIHEGPALAAQQAAAKVFGADRTYFVLNGTSSSNKVVNTSLLRRNDVVLFDR
NNHKSNHHGALFIAGAIPIYLEADRNGFGMVGPIDWSAFEEDTIRERLRNHPRLKGTDAW
KKERPIRVAIIEQCTYDGSVYNASKVLEKIGHLCQYIHFDEAWAGFGAFHPLMEHHFAMG
LELGPNDPGVIATQSTHKQLAGFSQASQIHVRDEHIRDKPFRTNHKRFNEAFMLQASTSP
FYPLFSSLDVNAQMHADKAGRVLWEDMVKLGIDGRKAVRLRFDGLLDPFVPDVVDYGGKS
VKWEDVPTDVLAREQEYWQLAPGAKWHGYRNLGKDAAMVDPTKFMLTTAGIDRATGNYQK
SGLPATILANYLREINVIPEKNDLNSILFLMTPAVGEGKMAMLLSALERFKAHYDADSPM
SAVVPGLYARNAERYRGYTLKQLAQEMHDFYAEKNVKELQRLCFRYESFPEQAMSARDAN
EALVGDEVDFVPMDQVKGRIAATLALIYPPGIGIIVPGERYDDSAQPMIDYFLTFEESCN
RFPGFSYEVQGVYQVREEGRIRFYTYVVKE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcccggtaaccgaatattttcgaattcttgtggttggaacgcagtatggcgac
aggatcgcccagctgatcgaagaccatctggatttcaagacgacggtctgcggcgatgag
gaggcagcgtccgccatccatggcggcgccgacctcggcgccatcgtgacgtcgcgagcg
gcggcggaagcggtcatcaaggcacgcgccgaacgcggctttcgcatgcctgtcttcctg
ctgagccgaagggaggacgaaaagttcggcgagccctacctgaaggacctggaaggcatt
ttcatcgccgacctcgaaacccgtgaattctacgaaaagcggctgcgcgcttccgtcgaa
gcctatgccgcaaccctgttgacgcctttcttcggcgaactgatgaaatatgactatgac
gccaaccgtgcatgggcgtgcccgggccatcagggcggccagttcttcatgcatcatcca
gccggacgcctcttctacgaacatatgggcgagaatgtcttccgcgatgacatctgcaat
gcgatggtttcgctcggcgacctgctgatccacgaaggaccggcgctggcggcgcagcag
gcagccgccaaggtgttcggcgcggaccgcacctatttcgtcctgaacggcacctcgtcc
tccaacaaggtggtcaatacatcgctgttgcgccgcaacgacgtggtcctgttcgacagg
aacaatcacaagtccaaccaccacggcgccctgttcatcgccggcgccatcccgatctac
ctggaagccgaccgcaacggtttcggcatggtcgggccgatcgactggtcggccttcgaa
gaggacacgatccgcgagagactgcggaatcatccccgcctgaagggaacggatgcgtgg
aaaaaagagcgcccgatccgggtggcgatcatcgaacagtgtacctatgacggcagcgtc
tacaatgcgagcaaggttctggagaagatcggccatctctgccagtacattcacttcgac
gaggcatgggcgggcttcggcgccttccatccgctgatggagcatcatttcgccatgggt
ctcgagctcggcccgaacgatcccggcgtgatcgccacccaatcgacccacaagcaactg
gccggtttctcgcaggcctcgcagatccacgttcgggacgaacatatccgtgacaagccc
ttccggacgaaccacaagcgattcaacgaagcgttcatgttgcaggcttcgacgtcgccc
ttctatccgctgttttccagtctcgacgtcaatgcgcagatgcatgccgacaaggcaggg
cgcgttctgtgggaggacatggtcaaactcggcatcgacggacgcaaggccgtgcgcctg
cgtttcgatggcctcctcgacccgtttgtgccggatgtcgtcgattacggcggcaagagc
gtgaaatgggaggatgtgccgaccgatgtgctggcgcgcgaacaggagtattggcaactg
gcgccgggggccaaatggcacggttaccgcaacctcggcaaagacgcggccatggtcgat
ccgacgaaattcatgttgacgacggcggggatcgatcgcgccaccggcaattaccagaaa
agcggcctgcctgcgacgatccttgccaattatctcagggaaatcaacgttatccccgaa
aagaacgacctcaacagcatcctgttcctgatgacgcccgccgtcggcgagggcaagatg
gccatgctgctgtcggcgctggagcgtttcaaggcgcattatgacgccgacagccccatg
tcggccgtcgtgcccgggctctacgcccgcaatgccgagcgctatcgcggctacacgctc
aagcagcttgcccaggaaatgcacgacttctacgcggaaaagaacgtgaaagagctgcaa
aggctttgcttccgctacgagtctttccccgaacaggccatgtcggcccgcgatgcgaat
gaagcgctggtcggcgatgaggtcgatttcgtgcccatggatcaggtcaagggccggatc
gcggcaaccttggcactgatctatccgccgggcatcggcatcatcgttcccggcgaacgc
tatgacgacagcgcccagccgatgatcgactatttcctgaccttcgaggaaagctgcaac
aggttcccgggcttctcctatgaggtccagggcgtctatcaggtccgcgaggaaggacgc
atccgcttctacacctatgtggtcaaggaatag
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