Rhizobium oryzihabitans: G3A56_27415
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Entry
G3A56_27415 CDS
T06770
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
roy
Rhizobium oryzihabitans
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roy03032
]
G3A56_27415 (topA)
03400 DNA repair and recombination proteins [BR:
roy03400
]
G3A56_27415 (topA)
Enzymes [BR:
roy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G3A56_27415 (topA)
DNA replication proteins [BR:
roy03032
]
Prokaryotic type
DNA Topoisomerases
G3A56_27415 (topA)
DNA repair and recombination proteins [BR:
roy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3A56_27415 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QIB41527
UniProt:
A0A7L5BRH2
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Position
p6:complement(17846..19957)
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AA seq
703 aa
AA seq
DB search
MKLMIVESPTKAKKIGSLLGSDWRVEASMGHIVDLPTDQMAVEPQTYQLTYVASERGRSV
ISRLKPLVAEADAIYLATDPDREGEAISEHLKRYLRIERYQRVTFNEITETGIKAALAAP
RPIDRRLVAAQEARRAADRLIGYRVSFPISTAAGQSLTAGRCQSPAVRLVVERQNEIDRF
KVTDHFSALAEFENGSWTAEWQTKSFLQGDDEYILDQSLAERAAACRRFTVTAAAEKPVA
KGPPAPFTTSALLQAAGATLGYPPALTQKLAQSLFEAGLITYHRTDNPNLSDDGIAAIGA
YAEGQGWQLSEKKRRWPLPEGAQEAHEAIRPTHVEDREAGEDDKQKALYKLIWQRAVASQ
LADAVYKTVTLDLTADAGGERFHFRARSAELVKQGWRIVAADEKSDDEDEDESTNGRVPM
LQPGTSVTATGGKILRKATKPPRRYTETSLIRKLEQMGIGRPSTFAAIVSNICNKKYVVV
EKRYLVPTQSGRAIVGNLVGRFDFAEYDFTKDLEKRLDLIAEGRERYVDVIADLDQRLDV
ELGKLASVKPAHPCPKCGKALRLVTGKSRSFFGCSGYRDGCPVICENDNGKPGAVIERSD
TPSEKQAAFAKRIAEENGLSLPEEVMASAKALSVWIDEALAAAPPRLASDKQREFIATLI
EQNGLQPPAGWPDNVTSDVASAFISKNGKAKGKSKPARRRKAS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcatgattgtcgaaagccctaccaaggctaagaaaattggatcgctgcttggt
tccgattggcgagtagaggccagcatgggccatattgtagatcttccaacggaccagatg
gccgttgaaccgcaaacataccagctcacctatgtagcatccgagcgcggccgatctgtc
atcagccggttgaagccattggtcgccgaggccgatgccatttatcttgcaacggacccg
gatcgtgagggggaggcgatttccgagcatctgaagcgttacttgcgcatcgagcggtat
cagcgggtcacattcaacgagataaccgagaccggtataaaggcggcactcgccgcgcct
cgcccgattgatcggcggcttgtcgcggcacaggaggcacgcagagcagcggatcggttg
atcggctaccgagtgtcctttccgatatcgacggcagcggggcagtccctgacagccggt
cgttgccagtcgcccgcagtccgcctcgttgtcgaacggcagaatgagatagaccgcttc
aaggtgacagaccatttttcggcgttagcggagtttgagaacggctcgtggaccgccgag
tggcagaccaaatcctttctgcagggcgatgacgaatacatcctcgatcagagtttggcc
gagcgagctgcggcttgccgccgcttcacggtgacggcagcggccgagaagcccgttgcc
aagggaccacccgcaccgtttacgacctccgcgctcttgcaggcggcgggagccaccctt
ggataccctccagccctgacacagaagcttgcacagagccttttcgaagccggtttgatt
acctaccaccggacagacaatccgaacctctcagatgacgggattgcggctatcggtgcc
tatgctgaggggcagggatggcagctttcggaaaaaaaacgacgctggccgctgcctgaa
ggagcacaggaggctcatgaggctattcgaccaactcatgttgaggatcgtgaggcgggg
gaggatgacaagcaaaaagcgctatacaagctgatttggcagcgcgccgttgcctcgcag
ctcgcagatgccgtctacaaaacagtgacgctcgatctcacggccgatgccggtggcgag
cgcttccatttccgtgctcgcagcgccgagctggttaagcaagggtggaggatcgttgct
gcggatgaaaagagcgatgacgaagatgaggacgagtcgaccaacgggcgcgtcccgatg
ctacagccaggtacttccgtgacagcgacgggaggcaagattttgcgcaaggcgacaaag
ccgccccggcgctacaccgaaaccagcttgatccgcaaacttgagcagatgggcatcggt
aggccatcgacctttgcggctatcgtatcgaatatctgcaacaagaaatatgttgtggtg
gaaaaacggtatctcgtcccgacacagagcggccgggccatcgtcggaaacctcgtcggc
cgttttgacttcgccgaatacgacttcaccaaagacctcgaaaaacgcctcgatctcata
gcggaaggcagagaacgctatgtcgatgtgatcgctgatcttgatcagcgcctcgatgtt
gagcttgggaagctcgcgagcgtgaagcctgcccacccatgtcctaagtgcggcaaggcg
ctgcgacttgtgacgggtaagtcgcggagctttttcggttgttcgggctatcgcgatgga
tgccctgtcatttgtgaaaacgacaacggcaagccgggagcagtcatcgagcggtcggat
acgccttctgagaagcaggcagcgtttgcaaagcggatcgcggaagagaatggcttatct
ctgccggaagaggttatggcgtctgcaaaagctctctcggtgtggattgatgaggccctt
gccgccgcgccgcctcgacttgccagcgacaagcagcgtgagttcatcgcgaccttgatc
gagcaaaatgggctacagccccctgccggatggccggataatgtcacaagcgatgtggcg
agcgccttcatttccaagaacgggaaggctaagggaaaatcgaagcccgcgcgcaggcgt
aaagcttcatga
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