Rhodococcus oxybenzonivorans: CBI38_00045
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Entry
CBI38_00045 CDS
T08279
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
roz
Rhodococcus oxybenzonivorans
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roz03032
]
CBI38_00045
03400 DNA repair and recombination proteins [BR:
roz03400
]
CBI38_00045
Enzymes [BR:
roz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBI38_00045
DNA replication proteins [BR:
roz03032
]
Prokaryotic type
DNA Topoisomerases
CBI38_00045
DNA repair and recombination proteins [BR:
roz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBI38_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AWK70205
UniProt:
A0A2S2BNK7
LinkDB
All DBs
Position
9551..11593
Genome browser
AA seq
680 aa
AA seq
DB search
MAAQKSDKSTSSKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIWEVVDNSVDEA
MAGYASKVEITLLEDGGVQVVDDGRGIPVGMHASGVPTVEVVLTQLHAGGKFDSDSYAVS
GGLHGVGISVVNALSTTLEVDIKRDGFRWTQTYTDSKPGELVKGDPTKETGTTVRFWADS
NIFETTTYSFETVARRLQEMAFLNKGLTITLTDERVSDAEVTEEVVSQVAEAPKTAEDES
AEAQSPAVHKVKTRIYHYPGGLEDYVRHINRTKQPIHNSVVGFTAKGTGHELEVAMQWNS
GYSESVHTFANTINTHEGGTHEEGFRSALTATVNKYALDKKLLKEKDPKLTGDDIREGLA
AIISVKVSEPQFEGQTKTKLGNTEVRSFVQKACNEHLSHWFEANPADAKTIVNKAVSSAQ
ARVAARKARELVRRKSATDLGGLPGKLADCRSNDPSKSEIYIVEGDSAGGSAKSGRDSMY
QAILPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADV
DGQHIATLLLTLLFRFMRPLVEHGHVYLAQPPLYKLKWQRSDPEFAYSDRERDVLVKAGL
ESGKKINKDDGIQRYKGLGEMNAKELWETTMDPTVRVLRLVTLDDAAAADELFSVLMGED
VEARRSFITRNAKDVRFLDV
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcccagaagtcagacaaaagcacctccagcaaggactacggcgcttcttccatc
accgtcctcgaaggactcgaagcagttcgtaagcgaccgggtatgtacatcggttccacc
ggtgaacgcggtctgcaccacctgatctgggaagtcgtcgacaactcggtcgacgaggcc
atggccggctacgccagcaaggtcgagatcacccttctcgaggacggcggagtccaggtc
gtcgacgacggtcgtggcattccggtcggaatgcacgcgtccggagttcccaccgtcgag
gtggtcctcacccagctgcacgccggcggaaagttcgactccgactcgtacgccgtctcc
ggtggtctgcacggtgtcggtatctccgtggtgaacgcgctgtccaccaccctcgaggtc
gacatcaagcgcgacggcttccgctggacccagacctacacggattccaagcccggcgag
ctcgtcaagggcgaccccaccaaggaaactggaacgaccgtccggttctgggccgactcg
aacatcttcgagaccaccacctacagcttcgagacggtcgcgcggcgccttcaggaaatg
gcattcctgaacaagggcctgacgatcacgctcaccgacgagcgcgtcagcgacgccgag
gtcaccgaggaggtcgtcagccaggtcgcggaagcgccgaagaccgcggaggacgagtcc
gccgaggcgcagtcccccgccgtccacaaggtcaagacccgcatctaccactacccgggc
ggtctcgaagactacgtgcggcacatcaaccgcacgaagcagccgatccacaactccgtc
gtcgggttcaccgccaagggcaccggccacgagctcgaggtggcaatgcagtggaactcc
ggttactcggagtcggtgcacacgttcgccaacacgatcaacacccacgaaggcggcacc
catgaggagggtttccggtcggcgctgaccgcaacggtcaacaagtacgcgctcgacaag
aagctcctcaaggagaaagaccccaagctgaccggtgacgacattcgtgaaggtctcgcg
gccatcatctcggtgaaggtgtccgagccgcagttcgaaggacagaccaagaccaagctc
ggcaacaccgaggtcaggtccttcgtgcagaaggcgtgtaacgagcacctgtcgcactgg
ttcgaggccaaccccgcagacgcgaagaccatcgtcaacaaggcggtgtcctcggcgcag
gcgcgtgtggcggcacgtaaggcgcgcgagctcgtgcgtcgcaagagcgccaccgacctc
ggtggtctaccgggcaagctcgccgactgccggtccaacgaccccagcaaatccgagatc
tacatcgtggagggtgactccgcaggcggctcggccaagtcggggcgtgactcgatgtac
caggcgatcctgccgctgcgcggaaagatcatcaacgtcgagaaggcgcgcatcgaccgt
gtcctgaagaacaccgaagtccagtcgatcatcactgcgttcggcaccggaattcacgac
gagttcgacatcgccaagctccgataccacaagatcgtgctgatggccgacgccgacgtc
gacggccagcacatcgcaacgctgctgctcacgctgctgttccgcttcatgcgcccgctc
gtcgagcacggtcacgtctacctggcacagcccccgctgtacaagttgaagtggcagcgc
agcgacccggagttcgcgtactccgaccgcgagcgggacgtcctggtgaaggccggtctc
gagtccggcaagaagatcaacaaggacgacggcatccagcggtacaagggtctcggcgag
atgaacgccaaggaactgtgggagaccaccatggatccgacggtgcgtgtgctgcgtctc
gtcaccctcgacgacgccgccgccgccgatgaactgttcagcgtcctcatgggcgaggac
gtggaggcccggcgtagcttcatcacccgtaacgccaaggacgttcgcttcctcgacgtg
tag
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