KEGG   Rhodococcus oxybenzonivorans: CBI38_07410
Entry
CBI38_07410       CDS       T08279                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
roz  Rhodococcus oxybenzonivorans
Pathway
roz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:roz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CBI38_07410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:roz03019]
    CBI38_07410
   03110 Chaperones and folding catalysts [BR:roz03110]
    CBI38_07410
   03029 Mitochondrial biogenesis [BR:roz03029]
    CBI38_07410
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roz04147]
    CBI38_07410
Enzymes [BR:roz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CBI38_07410
Messenger RNA biogenesis [BR:roz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CBI38_07410
Chaperones and folding catalysts [BR:roz03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CBI38_07410
Mitochondrial biogenesis [BR:roz03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CBI38_07410
Exosome [BR:roz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CBI38_07410
  Exosomal proteins of other body fluids (saliva and urine)
   CBI38_07410
  Exosomal proteins of breast cancer cells
   CBI38_07410
  Exosomal proteins of colorectal cancer cells
   CBI38_07410
  Exosomal proteins of bladder cancer cells
   CBI38_07410
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AWK71437
UniProt: A0A2S2BS24
LinkDB
Position
1565243..1566868
AA seq 541 aa
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTARLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDAERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDSDAIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNAANN
EYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPAGDPTGGMGGMD
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcgaggactcaac
gccctcgccgacgcagtcaaggtgacgttgggccccaagggtcgcaacgtcgtgctcgag
aagaagtggggagctcccacgatcaccaacgacggcgtttccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgccgagctggtcaaggaggtcgccaagaagacg
gacgacgtcgccggcgacggaaccaccaccgcaaccgtgctcgctcaggctctcgtgcgt
gagggcctccgcaacgttgctgccggcgccaacccgctcggcctcaagcgcggcatcgag
aaggccgtcgaggccgtcaccgcgcgtctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgctggtatctccgccggcgacccgtccatcggtgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgtttcgacaagggctacatctcggcg
tacttcgccaccgatgcagagcgtcaggaagccgtcctcgaggacgcgtacatcctgctc
gtgagctccaagatctccaccgtcaaggacctgctgccgctgctggagaaggtcatccag
tcgggcaagccgctggtcatcatcgcggaggacgtcgagggcgaagccctgtccaccctg
gtggtcaacaagattcgtggcaccttcaagtccgtggccgtcaaggcccccggattcggt
gaccgccgcaaggcgcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggcctctccctggagaccgccggactcgagctcctcggtcaggcccgcaag
gtcgtcatcaccaaggacgagaccaccatcgtcgagggtgccggcgattccgacgccatc
gccggtcgcgtgagccagatccgcgccgagatcgagaacagcgacagcgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgttgcagtcatcaaggccggt
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaagatgccgtgcgtaac
gccaaggctgccgtcgaagagggcatcgttgccggtggtggcgtggccctgctgcagtcg
gcccccgcgctcgacgacctcaagctcgaaggtgacgaggccaccggtgcgaacatcgtt
cgcgtcgccctcgaagctccgctgaagcagatcgccttcaacgccggcctcgagcccggc
gtcgtcgccgagaaggtccgcaacctgcccgcaggtcacggcctcaacgctgcgaacaac
gagtacggcgacctgctcgaagcaggcatcaacgacccggtcaaggtcacccgctccgcg
ctgcagaacgcagcgtcgatcgcggctctgttcctcaccaccgaggccgtcgtcgccgac
aagccggagaaggccggagcgcccgcgggcgacccgaccggcggcatgggcggcatggac
ttctga

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